Protein Model on 8h10_B_1_HA_1 (TEMPLATE: 8h10 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(SPIKE_SARS) B 1 (B) polymer(polypeptide(L)) [1026 aa] Spike glycoprotein :SPIKE_SARS
2 b HA 1 (B) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 778Y 783N 785S 786Q (identity: 100.0 %/93.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8h10_B_1 identity=93.5%
queryA        31:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 130
                :****************************************       *****************************************************:
8h10_B_1      21:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHXXXXXXXNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 120
SecStr          : EEEE S  EE        SEEEEEEEEE  TTEEEEEE -------   EE SS EEEEEEESS  EEEEEEESSSSTTS EEEEEE SS EEEEEE  :    
ExpBur          :eebebbebbbbbeeeeeeeeeeeebeeebbebeeebebee-------eeebebeebbbbbbbbeeeebebbbbbbebeeebebbbbbeeeeeebbebbbb:    

queryA       131:ELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 230
                :********            ****************             ***************************************************:
8h10_B_1     121:ELCDNPFFXXXXXXXXXXXXMIFDNAFNCTFEYISDXXXXXXXXXXXXXKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 220
SecStr          : B SS   ------------  BS   S  EEEEE ------------- EEEEEEEEEETTEEEEEEEEE   S SS      EEEEEEEE       E:    
ExpBur          :eeeeebee------------ebeeeeeeeeeeeeee-------------ebbebbbbbeeeeebbbbebeeebeeeeebeeeeeebeeeeebebebebee:    

queryA       231:FRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 330
                :*******           **********************************************************************************:
8h10_B_1     221:FRAILTAXXXXXXXXXXXAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 320
SecStr          :EEEEE  -----------  EEEEEE EEEEEEEEE TTS EEEEEETTT HHHHHHHHHTSS   SEEEE    S     EEEE      B  HHHHHS:    
ExpBur          :bbbbeee-----------eebbbbbebeebbbbbebbeeeebeebbbbbbebbbbbbbeeeeeebeebeeebeeebeeeeeebbbbeeeeeebebeebbe:    

queryA       331:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 430
                :*************************************** ************************************************************:
8h10_B_1     321:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVCATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 420
SecStr          : S   BSTT EEEEE SEE    GGGTT   SEEEEESS GGGSSS  BSEEEEEEEEE GGGGGGSSTT  SHHHHHT    SS  EEEEEEE HHHH :    
ExpBur          :eeebbbbbebeeeebeebbbeeeebeeeeeeeeeeeeeeeeeebeebbbbebebbbbbbbbebbebbbeeeeeebbbebbebbeebebbbbbbebeeebb:    

queryA       431:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 530
                :****************************************************************************************************:
8h10_B_1     421:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 520
SecStr          : SS BTT EEE   SS   TT        B TTSS   TTSSS B SEEE  B SSS GGGS EEEEEEEEE SSS   EE          SS BEEEET:    
ExpBur          :eeebbeebebbeeeeeebeeeeeeeeeeebbeeeeeeeeeeeebeebbeebebeeeeeebebbbbbbbebbeeeeeebebbbeeeeeebeeeebbebbbb:    

queryA       531:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 630
                :****************************************************************************************************:
8h10_B_1     521:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 620
SecStr          :TEE  BEEEE      TT  EEE TTS EEEEE TTT  EEEEE S  S EEEEES TTT    EEEEET  GGGHHHHHTGGGS HHHHTTTSSS EEE:    
ExpBur          :bbeeebbbeeeeeebeeeebbbeeeeeebebbbbeeeeebbebeebeeeebbbbbbbeeeeeebbbbbbebebeebeeebbbeebeeebeebbeeeeeee:    

queryA       631:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 730
                :********************************        ************************************************************:
8h10_B_1     621:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 720
SecStr          : SSEEEES EE SS    SEEEETTEEEEEE --------  EEEEEE            TTEEEEEEEEEEEEEEEEEE    EEEE HHHHHSTT HH:    
ExpBur          :beebbbbebeeeeeeeeeebebeeebbbbeee--------eeebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbebebeebbbeebee:    

queryA       731:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 830
                :*********************************************************************************                  *:
8h10_B_1     721:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLAXXXXXXXXXXXXXXXXXXD: 820
SecStr          :HHHHHHTSTTSTHHHHHHHHHHHHHHHHHHHHHH   SS     S  EETTEE GGGS  SSSS SS HHHHHHTTSS   ------------------ :    
ExpBur          :beebbeeeeeebeebeeebeebbebbeebbeebbeebeeeeeeeeebebebbebeebbeeeeeeeeebebbebbbeebeee------------------e:    
Contact         :                                               b    b bb                                            

queryA       831:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 930
                :****************************************************************************************************:
8h10_B_1     821:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 920
SecStr          : HHHHHHTTEEEE  SS HHHHHHHHHHHHHHHHHT SSSSSSS     HHHHHHHHHHTTT  HHHHHHTHHHHHHHHHHHHHHHHHHHHS   TTHHH:    
ExpBur          :eeeebeeebbeeeeeeeeeeebbeebbbbbbbbbebbebbeeeeeeeeebeebbbebbeebebeeebbeeeeeebbeebbebbeebeeebeeeeeebeeb:    

queryA       931:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1030
                :************************************ ***************************************************************:
8h10_B_1     921:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLCKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1020
SecStr          :HHHHHHHHHHHHHHHHGGG  TTSS S HHHHSSSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS   STTSSSSSEE:    
ExpBur          :eebbeebeebbeebeeebeeeeebeeeebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeeebeebbebbeebbbeebeeeebbbeeeb:    

queryA      1031:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPLQP:1125
                :***********************************************************************************************:
8h10_B_1    1021:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPLQP:1115
SecStr          :EEEEEEEETTEEEEEEEEEEEEEEEEEEEES EESSS EEEESSSEEEE SSSEEEE SSS   EE BSTTEEE S TTSSTT EE   B S   :    
ExpBur          :bbbbbbbbbebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbeeeeebebbbebbeeeeebbeeebeeeeeeeeeeeeeeeebeeeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123