Protein Model on 8h10_A_1_B_1
(TEMPLATE: 
8h10
)Protein Model on 8h10_A_1_B_1
(TEMPLATE: 8h10
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | A 1 (A) | polymer(polypeptide(L)) [1026 aa] | Spike glycoprotein :SPIKE_SARS | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [1026 aa] | Spike glycoprotein :SPIKE_SARS | 54L 56Q 301Q 368G 369V 370S(C) 373K 377L 383Y 392D 395R 401Q 402T 403G 404V 407D 408Y 413P 417M 442Y 447K 450P 451F 452E 453R 455I 456S 489I 491Y 503L 531G 532L 533T 535T 543K 544R 545F 546Q 549Q 553R 555V 556S 557D 575P 576C 577S 633A 651P 654A 655G 679M 681L 683A 684D 685S 687I 688A 689Y 690S 691N 693T 694I 695A 697P 947Q 950S 951N 952F 953G 967D(C) 969V 977R 984Q 988T 992Q 995I 999E 1021R 1022V 1023D 1028G 1054E 1056N 1059T 1061P 1071F 1072P 1073R 1076V 1089R 1105S 1110V (identity: 97.8 %/93.5 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8h10_A_1 identity=93.5% |
queryA 31:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 130
:**************************************** *****************************************************:
8h10_A_1 21:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHXXXXXXXNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 120
SecStr : EEEE S EE SEEEEEEEEE TTEEEEEE ------- EE SS EEEEEEESS EEEEEEESSSSTTS EEEEEE SS EEEEEE :
ExpBur :eebebbebbbbbeeeeeeeeeeeebeeebbebeeebebee-------eeebebeebbbbbbbbeeeebebbbbbbebeeebebbbbbeeeeeebbebbbb:
Contact : b b
queryA 131:ELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 230
:******** **************** ***************************************************:
8h10_A_1 121:ELCDNPFFXXXXXXXXXXXXMIFDNAFNCTFEYISDXXXXXXXXXXXXXKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 220
SecStr : B SS ------------ BS S EEEEE ------------- EEEEEEEEEETTEEEEEEEEE S SS EEEEEEEE E:
ExpBur :eeeeebee------------ebeeeeeeeebeeeee-------------ebbebbbbbeeeeebbbbebeeebeeeeebeeeeeebeeeeebebebebee:
queryA 231:FRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 330
:******* **********************************************************************************:
8h10_A_1 221:FRAILTAXXXXXXXXXXXAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 320
SecStr :EEEEE ----------- EEEEEE EEEEEEEEE TTS EEEEEETTT HHHHHHHHHTSS SEEEE S EEEE B HHHHHS:
ExpBur :bbbbbee-----------eebbbbbebeebbbbbebbeeeebeebbbbbbebbbbbbbeeeeeebeebeeebeeebeeeeeebbbbeeeeeebebeebbe:
Contact : b
queryA 331:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 430
:*************************************** ************************************************************:
8h10_A_1 321:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVCATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 420
SecStr : S BSTT EEEEE SEE GGGTT SEEEEESS GGGSSS BSEEEEEEEEE GGGGGGSSTT SHHHHHT SS EEEEEEE HHHH :
ExpBur :eeebbbbbebeeeebeebbbeeeebeeeeeeeeeeeeebeeeebeebbbbebebbbbbbbbebbebbbeeeeeebbbebbebbeebebbbbbbebeeebb:
Contact : bbb b b b b b bbbb bb b b
queryA 431:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 530
:****************************************************************************************************:
8h10_A_1 421:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 520
SecStr : SS BTT EEE SS TT B TTSS TTSSS B SEEE B SSS GGGS EEEEEEEEE SSS EE SS BEEEET:
ExpBur :eeebbeebebbeeeeeebeeeeeeeeeeebbeeeeeeeeeeeebeebbeebebeeeeeebebbbbbbbebbeeeeeebebbbeeeeeebeeeebbebbbb:
Contact : b b bbbb bb b b b
queryA 531:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 630
:****************************************************************************************************:
8h10_A_1 521:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 620
SecStr :TEE BEEEE TT EEE TTS EEEEE TTT EEEEE S S EEEEES TTT EEEEET GGGHHHHHTGGGS HHHHTTTSSS EEE:
ExpBur :ebeeebbbeeeeeebeeeebbbeeeeeebebbbbeeeeebbebeebeeeebbbbbbbeeeeeebbbbbbebebeebeeebbbeebeeebeebbeeeeeee:
Contact :bbb b bbbb b b bbb bbb
queryA 631:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 730
:******************************** ************************************************************:
8h10_A_1 621:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 720
SecStr : SSEEEES EE SS SEEEETTEEEEEE -------- EEEEEE TTEEEEEEEEEEEEEEEEEE EEEE HHHHHSTT HH:
ExpBur :beebbbbebeeeeeeeeeebebeeebbbbeee--------eeebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbebebeebbbeebee:
Contact : b b bb b b bbb bbbbb bbb b
queryA 731:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 830
:********************************************************************************* *:
8h10_A_1 721:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLAXXXXXXXXXXXXXXXXXXD: 820
SecStr :HHHHHHTSTTSTHHHHHHHHHHHHHHHHHHHHHH SS S EETTEE GGGS SSSS SS HHHHHHTTSS ------------------ :
ExpBur :beebbeeeeeebeebeeebeebbebbeebbeebbeebeeeeeeeeebebebbebeebbeeeeeeeeebebbebbbeebeee------------------e:
queryA 831:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 930
:****************************************************************************************************:
8h10_A_1 821:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 920
SecStr : HHHHHHTTEEEE SS HHHHHHHHHHHHHHHHHT SSSSSSS HHHHHHHHHHTTT HHHHHHTHHHHHHHHHHHHHHHHHHHHS TTHHH:
ExpBur :eeeebeeebbeeeeeeeeeeebbeebbbbbbbbbebbebbeeeeeeeeebeebbbebbeebebeeebbeeeeeebbeebeebbeebeeebeeeeeebeeb:
queryA 931:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1030
:************************************ ***************************************************************:
8h10_A_1 921:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLCKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1020
SecStr :HHHHHHHHHHHHHHHHGGG TTSS S HHHHSSSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS STTSSSSSEE:
ExpBur :eebbeebeebbeebeeebeeeeebeeeebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeeebeebbebbeebbbeebeeeebbbeeeb:
Contact : b bbbb b b b b b b b b bbb b
queryA 1031:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPLQP:1125
:***********************************************************************************************:
8h10_A_1 1021:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPLQP:1115
SecStr :EEEEEEEETTEEEEEEEEEEEEEEEEEEEES EESSS EEEESSSEEEE SSSEEEE SSS EE BSTTEEE S TTSSTT EE B S :
ExpBur :bbbbbbbbbebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbeeeeebebbbebbeeeeebbeeebeeeeeeeeeeeeeeeebeeeeee:
Contact : b b b b bbb b b b b
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