Protein Model on 8h0y_C_1_BA_1 (TEMPLATE: 8h0y )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(SPIKE_SARS) C 1 (C) polymer(polypeptide(L)) [1031 aa] Spike glycoprotein :SPIKE_SARS
2 b BA 1 (A) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 339A (identity: 100.0 %/94.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8h0y_C_1 identity=94.1%
queryA        31:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 130
                :*****************************************      *****************************************************:
8h0y_C_1      21:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTXXXXXXNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 120
SecStr          :  EEETT  EE   S    S EEEEEEEE  TTEEEEEEE ------   EE TT EEEEEEESS    EEEEESSSSTTS EEEEEE SS EEEEEEEE:    
ExpBur          :eebebbebbbbbbeeeebbeeeeebeeebbebebebebeee------eeebebeebbbbbbbbeeebbebbbbbbebeeebebbbbbeeeebeebebbbb:    

queryA       131:ELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 230
                :*********           ******************           ***************************************************:
8h0y_C_1     121:ELCDNPFFAXXXXXXXXXXXMIFDNAFNCTFEYISDAFXXXXXXXXXXXKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 220
SecStr          :EE S     -----------  EEEEEEEEEEEE    ----------- EEEEEEEEEETTEEEEEEEEEE   SSS      EEEEEEEE       E:    
ExpBur          :ebeeebeeb-----------ebeeeeeeeeeeeebeee-----------eebebbbbbeeeeebebbebeeebeeeeebeeeeebbeeeeebebebebee:    

queryA       231:FRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 330
                :*******           **********************************************************************************:
8h0y_C_1     221:FRAILTAXXXXXXXXXXXAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 320
SecStr          :EEEE   ----------- EEEEEEE EEEEEEEEE TTS EEEEEETTSSHHHHHHHHHT S   SEEEE    B     EEEE      B  HHHHTT:    
ExpBur          :bbbbbee-----------ebbbbbbebeebebbbebeeebebeebbbbeeebbbebbbeeeebebeebeeebeebeeeeeeebbbbbeeeeebebeebbe:    

queryA       331:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 430
                :*************************************** ************************************************************:
8h0y_C_1     321:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVCATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 420
SecStr          : S    GGG EEEEE SEE   GGGTTT   SEEEEESS GGGTTS EESSEEEEEEEEEGGGGGGSSTT  SHHHHHT    SS  EEEEEEE HHHH :    
ExpBur          :eeebbbbbebeeeebeebebeeeebeeeeeeeeeebeebeeeebeebbbbebebbbbbbbeebbebbbeeeeeebbbebbebbeebebbbbbbebeeebb:    
Contact         :        b                                                                                           

queryA       431:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 530
                :****************************************************************************************************:
8h0y_C_1     421:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 520
SecStr          :BSS EEEEEEE   SS   TT        B SSSS   TTSTT B SEEEEEEBTTS GGGSEEEEEEEE  BSSS   EE S        SSEEEEEET:    
ExpBur          :eeebbeebebbeeeeeebeeeeeeeeeeebbeeeeeeeeeeeebeebbeebebeeeeeebebbbbbbbebbebeeeebebbbeeeeeebeeeebbebbbb:    

queryA       531:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 630
                :*************************************************************************               ************:
8h0y_C_1     521:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCXXXXXXXXXXXXXXXWRIYSTGNNVFQ: 620
SecStr          :TEEEEEEEEE      TT  EEE TT  EEEEE SSS  EEEEE SB   EEEEE  TTT S  EEEETT   ---------------   S   S EEE:    
ExpBur          :bbeeebbbeeeeeebeeeebbeeeeeeeeebbbbbeeeebbebeebeebebbbbbbbeeeeeebbbbbeebee---------------eebeeeeeeeee:    

queryA       631:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 730
                :********************************        ************************************************************:
8h0y_C_1     621:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 720
SecStr          : SSSEEES EE S     SEEEETTEEEEEE --------  EEEEEE            SSEEEEEEEEEEEEEEEEEE    EEEE HHHHHT S HH:    
ExpBur          :bebbbbbebeeeeeeeeeebebeeebbbbeee--------eeebbbbeeeeeeeeeeeeeeeeeebbeebebebeeeebbbbbbbbebebeebbbeebee:    

queryA       731:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 830
                :****************************************************************************************************:
8h0y_C_1     721:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 820
SecStr          :HHHHHGGG HHHHHHHHHHHHHHHHHHHHHHHHH   SS     S  BSSS B GGGS  TTSSSSS HHHHHHHTSS  S SSS   HHHHHSS SS  :    
ExpBur          :beebbeeeeeebeebeeebeebbebbbebbeebbeebeeeeeeeeebebebbebeebbbeeeeeeebbebbbbbbeebeeeeeeeeeeeeebeeeeeeee:    

queryA       831:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 930
                :****************************************************************************************************:
8h0y_C_1     821:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 920
SecStr          :HHHHHHTTTEEEE  SS HHHHHHHHHHHHHHHHHTTTTTTTSS     HHHHHHHHHHHHT  THHHHTSHHHHHHHHHHHHHHHHHHHHS  S SHHH:    
ExpBur          :eebebeeebbebeeeeeeeeebbeebbbbbbbbbebbebbeeeeeeeeebeebbbebbeebebeeebbeeeeeebbeebbebbeebeeebeeeeeebeeb:    

queryA       931:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1030
                :************************************ ***************************************************************:
8h0y_C_1     921:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLCKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1020
SecStr          :HHHHHHHHHHHHHHHHGGG  TTSS S HHHHHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS   STTSSSSSEE:    
ExpBur          :eebbeebeebbeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeeebeebeeebeebbebbeebbbebbeeeebbbeeeb:    

queryA      1031:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1123
                :*********************************************************************************************:
8h0y_C_1    1021:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1113
SecStr          :EEEEEEEETTEEEEEEEEEEEEEEEEEEEES EEETTEEEEESSSEEEE SS EEEE SSS   B  BTTTEEE S TTSSTT EE   B   :    
ExpBur          :bbbbbbbbbebbbbbbbbbeeeeeeebeebebbbbeeebbeeeebbbbeeeeebebbbeebbeeeebbeeebeeeeeeeeeeeeeeeebeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123