Protein Model on 8h0y_A_1_C_1
(TEMPLATE: 
8h0y
)Protein Model on 8h0y_A_1_C_1
(TEMPLATE: 8h0y
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | A 1 (B) | polymer(polypeptide(L)) [1019 aa] | Spike glycoprotein :SPIKE_SARS | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [1031 aa] | Spike glycoprotein :SPIKE_SARS | 56Q 301Q 303S 304N 306R 368G 369V 370S(C) 373K 377L 383Y 390K 395R 400G 401Q 402T 403G 404V 407D 408Y 417M 440Y 442Y 447K 450P 451F 452E 453R 456S 489I 491Y 502E 503L 504L 506A 507P 531G 533T 537V 543K 544R 545F 546Q 548F 549Q 550Q 551F 552G 553R 554D 555V 556S 557D 560D 572D 574S 575P 576C 577S 578F 599Q 600D 601V 602N 620R 630Q 651P 653G 654A 655G 679M 681L 682G 683A 685S 686S 687I 688A 689Y 691N 693T 694I 695A 697P 939Q 947Q 950S 951N 952F 953G 968K 969V 984Q 985S 988T 992Q 995I 999E 1021R 1022V 1023D 1027K 1028G 1054E 1056N 1059T 1061P 1071F 1072P 1073R 1089R 1105S 1110V 1112I (identity: 99.1 %/93.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8h0y_A_1 identity=93.0% |
queryA 31:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 130
:***************************************** **************** ***********************************:
8h0y_A_1 21:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTXXXXXXNPVIPFKDGIYFAATEXXNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 120
SecStr : EEEE S EE SS S EEEEEEEE TTEEEEEEE ------ EE S EEEEEE -- EEEEEEESSSSTTS EEEEEE SS EEEEEEEE:
ExpBur :eeeebbebbbbbeeeeebbeeeeebeeebbbbebebebeee------eeebebeebbbbbbbb--eebebbbbbbebeeeeebbbbbeeeeebebebbbb:
Contact : b
queryA 131:ELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 230
:********* ****************** ***************************************************:
8h0y_A_1 121:ELCDNPFFAXXXXXXXXXXXMIFDNAFNCTFEYISDAFXXXXXXXXXXXKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 220
SecStr :EE SS ----------- EEEEEEEEEEEE ----------- EEEEEEEEEETTEEEEEEEEEE SS EEEEEEEEE E:
ExpBur :ebeeebeeb-----------ebeeeeeeeeeeeeeeee-----------eebebbbbbeeeeebebbebeeebeeeebbeeeeebbeeeeebebebebee:
queryA 231:FRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 330
:******* *********************************************************************************:
8h0y_A_1 221:FRAILTAXXXXXXXXXXXXAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 320
SecStr :EEEEE ------------ EEEEEE EEEEEEEEE TTS EEEEEETTSSHHHHHHHHHT S SEEEEE B EEEE B HHHHTT:
ExpBur :bebbbee------------ebbbbbebeebebbbebeeebebeebbbbeeebbbebbbeeeebebeebeeebeebeeeeeeebbbbeebeeebebeebbe:
Contact : b bb b
queryA 331:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 430
:*************************************** ************************************************************:
8h0y_A_1 321:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVCATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 420
SecStr : S BSTT EEEEE SEE GGGGTT SEEEEESS GGGTTT EESSEEEEEEEEEGGGGGGSSSS SHHHHHT TT EEEEEEE HHHH :
ExpBur :eeebbbbbebeeeebeebbbeeeebeeeeeeeeeebeeeeeeebeebbbbebebbbbbbbeebbebbbeeeeeebbbebbebbeebebbbbbbebeeebb:
Contact : bbb b b b b b bbbbb bb b
queryA 431:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 530
:****************************************************************************************************:
8h0y_A_1 421:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 520
SecStr : TT TT EEE SS TT B SSSS TTSTT B SEEE TTS GGGSEEEEEEEE BSSS EE S SSEEEEEET:
ExpBur :eeebbeebebbeeeeeebeeeeeeeeeeebbeeeeeeeeeeeebeebbeebebeeeeeebebbbbbbbebbebeeeebebbbeeeeeeeeeeebbebbbb:
Contact : b b b bbbb b b b bbb bb
queryA 531:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 630
:************************************************************************* ************:
8h0y_A_1 521:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCXXXXXXXXXXXXXXXWRIYSTGNNVFQ: 620
SecStr :TEEEEEEEEE TT EEE TT EEEEE SSS EEEEE SB S EEEEE TTT S EEEESS --------------- S S EEE:
ExpBur :bbeeebbbeeeeeebeeeebbeeeeeeebebbbbbeeeebbebeebeebbbbbbbbbbeeeeeebbbbeeeee---------------eebeeeeeeeee:
Contact :b b b bbbb bbbbbbbbbb b b bbbbb bbbb b b
queryA 631:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 730
:******************************** ************************************************************:
8h0y_A_1 621:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 720
SecStr : SS EEES EE S B SEEEETTEEEEEE -------- EEEEEEB SSEEEEEEEEEEEEEEEEEE EEEE HHHHHTSS HH:
ExpBur :beebbbbebeeeeeeeeeebebeeebbbbbee--------eeebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbebebeebbbeebee:
Contact : b bbb b bbb bbbbb b bbb b
queryA 731:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 830
:******************************************************************************** ********* **:
8h0y_A_1 721:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLXXXXFMKQYGECLXXXXXRD: 820
SecStr :HHHHTTTT HHHHHHHHHHHHHHHHHHHHHHHHH SS S EETTEE TTSS SSSSSSS HHHHHHHHHS ---- TTT ----- :
ExpBur :beeebeeeeeebeebeeebeebbebbbebbeebbeebeeeeeeeeebebeebebeebbbeeebeeebbebbbbbbeebee----eebeeeebe-----ee:
queryA 831:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 930
:****************************************************************************************************:
8h0y_A_1 821:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 920
SecStr :HHHHHHHTTEEEE SS HHHHHHHHHHHHHHHHHHTTTTTSSS HHHHHHHHHHTTT SHHHHTTHHHHHHHHHHHHHHHHHHHHS S SHHH:
ExpBur :eebebeeebbeeeeeeeeeeebbeebbbbbbbbbebbebbeeeeeeeeebbebbbebbeebebeeebbeeeeeebbebbbebbeebeeebeeeeeebeeb:
queryA 931:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1030
:************************************ ***************************************************************:
8h0y_A_1 921:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLCKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1020
SecStr :HHHHHHHHHHHHHHHHTTS TTSS S HHHHHHSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS STTSSSSSEE:
ExpBur :eebbeebeebbeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeeebeebeeebeebbebbeebbbeebeeeebbbeeeb:
Contact : b b bbbb bb bb b b b b bbb bb
queryA 1031:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1123
:*********************************************************************************************:
8h0y_A_1 1021:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1113
SecStr :EEEEEEEETTEEEEEEEEEEEEEEEEEEEES EEETTEEEEESSSEEEE SS EEEE SSS B BTTTEEE S TTSSTT EE B :
ExpBur :bbbbbbbbbebbbbbbbbbeeeeeeebeebebbbbeeebbeeeebbbbeeeeebebbbebbbeeeebbeeebeeeeebeeeeeeeeeebeeee:
Contact : b b b b bbb b b b b
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[assembly_id:1]
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