Protein Model on 8h0x_A_1_B_1
(TEMPLATE: 
8h0x
)Protein Model on 8h0x_A_1_B_1
(TEMPLATE: 8h0x
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | A 1 (A) | polymer(polypeptide(L)) [1039 aa] | Spike glycoprotein :SPIKE_SARS | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [1039 aa] | Spike glycoprotein :SPIKE_SARS | 56Q 301Q 303S 304N 306R 342R 368G 369V 370S(C) 373K 377L 383Y 390K 392D 395R 400G 401Q 402T 403G 404V 407D 408Y 417M 440Y 442Y 447K 450P 451F 452E 453R 456S 479N 489I 491Y 502E 503L 504L 531G 533T 534G 537V 543K 544R 545F 546Q 548F 549Q 550Q 551F 552G 553R 554D 556S 557D 560D 572D 574S 575P 576C 577S 578F 599Q 600D 601V 602N 620R 651P 653G 654A 655G 679M 681L 682G 683A 684D 685S 687I 688A 689Y 690S 691N 693T 694I 695A 697P 939Q 943T 947Q 950S 951N 952F 953G 968K 969V 984Q 985S 988T 992Q 995I 999E 1021R 1022V 1023D 1028G 1054E 1056N 1059T 1060A 1061P 1071F 1072P 1089R 1103F 1105S (identity: 99.1 %/94.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8h0x_A_1 identity=94.9% |
queryA 31:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 130
:****************************************************************************************************:
8h0x_A_1 21:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 120
SecStr : EEEESS EE SS S EEEEEEEE TTEEEEEEE SS EE S EEEEEEESS EEEEESS SSSS EEEEEE SS EEEEEEEE:
ExpBur :eebebbebbbbbeeeeebbeeeeebeeebbbbeeebebebeeeeeeebeebebeebbbbbbbbeeebbebbbbbbebeeebebbbbbeeeeeebbebbbb:
Contact : b
queryA 131:ELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 230
:********* ******************* ****************************************************:
8h0x_A_1 121:ELCDNPFFAXXXXXXXXXXTMIFDNAFNCTFEYISDAFXXXXXXXXXXFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 220
SecStr :EEEEEEEE ---------- EEEEEEEEEEEEEE ---------- EEEEEEEEEETTEEEEEEEEEE SSS EEEEEEEEE E:
ExpBur :ebeeebebe----------eebeeeeeeeeeeeeeeee----------eeebebbbbbeeeeebbbbebeeebeeeeebbeeeebbeeeeebebebebee:
queryA 231:FRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 330
:******* **********************************************************************************:
8h0x_A_1 221:FRAILTAXXXXXXXXXXXAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 320
SecStr :EEEEEE ----------- EEEEEE EEEEEEEEE SSS EEEEEETTSSHHHHHHHHHT S SEEEE EEEEE SB HHHHHS:
ExpBur :bbbbbee-----------ebbbbbbebeebebbbebeeebebeebbbbeeebbbebbbeeeebebeebeeebeebeeeeebebbbbeeeeeebebeebbe:
Contact : b bb b
queryA 331:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 430
:*************************************** ************************************************************:
8h0x_A_1 321:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVCATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 420
SecStr : S STT EEEEE SEE GGGGTT SEEEEESS GGGTTS EESSEEEEEEEEEGGGGGGSSTT SHHHHHT TT EEEEEEE HHHH :
ExpBur :eeebbbbbebeeeebeebbbeeeebeeeeeeeeeebeebeeeebeebbbbebebbbbbbbeebbebbbeeeeeebbbebbebbeebebbbbbbebeeebb:
Contact : b bbb b b b b b b bbbbb bb b
queryA 431:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 530
:****************************************************************************************************:
8h0x_A_1 421:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 520
SecStr :BSS EEEEEEE SS TT B SSSS SSSSS B SEEEEEEBSSS GGGSEEEEEEEE BSSS EE S SSEEEEEET:
ExpBur :eeebbeebebbeeeeeebeeeeeeeeeeebbeeeeeeeeeeeebeebbeebebeeeeeebebbbbbbbebbebeeeebebbbeeeeeeeeeeebbebbbb:
Contact : b b b bbbb b b b b bbb
queryA 531:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 630
:************************************************************************* ************:
8h0x_A_1 521:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCXXXXXXXXXXXXXXXWRIYSTGNNVFQ: 620
SecStr :TEEEEEEEEE TT EEE TT EEEEE SSS EEEEE S EEEEE TTT S EEEESS --------------- S S EEE:
ExpBur :beeeebebeeeeeebeeeebbbeeeeeeebbbbbeeeeebbebeebeebebbbbbbbeeeeeeebbbbeebee---------------eebeeeeeeeee:
Contact :b bb b bbbb bbbbbbb bb b b bbbbb bbbb b
queryA 631:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 730
:******************************** ************************************************************:
8h0x_A_1 621:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 720
SecStr : SS EEES EE SS SEEEETTEEEEEE -------- EEEEEE SSEEEEEEEEEEEEEEEEEE EEEE HHHHHSTT HH:
ExpBur :beebbbbebeeeeeeeeeebebeeebbbbeee--------eeebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbebebeebbbeebee:
Contact : b bbb b bbbbb bbbbb bbb b
queryA 731:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 830
:****************************************************************************************************:
8h0x_A_1 721:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 820
SecStr :HHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHH SS S EETTEE SSSS SSSSSSS HHHHHHHHHS S SSS HHHHHH SSS :
ExpBur :beeebeebeeebeebeeebeebbebbeebbeebbeebeeeeeeeeebebeebebeebbbeeeeeeeebebbebbbeebeeeeeeeeeeeeebeeeeeeee:
queryA 831:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 930
:****************************************************************************************************:
8h0x_A_1 821:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 920
SecStr :HHHHHHTTTEEEE SS HHHHHHHHHHHHHHHHHTTTTTTTSS HHHHHHHHHHHTT HHHHHHSHHHHHHHHHHHHHHHHHHHHS STTHHH:
ExpBur :ebbebeeebbebeeeeeeeeebbeebbbbbbbbbebbebbeeeeeeeeebeebbbebbeebebeeebbeeeeeebbeebbebbeebeeebeeeeeebeeb:
queryA 931:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1030
:************************************ ***************************************************************:
8h0x_A_1 921:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLCKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1020
SecStr :HHHHHHHHHHHHHHHHGGG SSSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS STTSSSSSEE:
ExpBur :bebbeebeebbeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeeebeebbebbeebbbbebeeeebbbeeeb:
Contact : b b b bbbb bb bb b b b b bbb b
queryA 1031:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1123
:*********************************************************************************************:
8h0x_A_1 1021:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1113
SecStr :EEEEEEEETTEEEEEEEEEEEEEEEEEEEES EESSS EEEESSSEEEE SS EEEE SSS B BTTTEEE S TTSSTT EE B :
ExpBur :bbbbbbbbbebbbbbbbbbeeeeeeebeebebbbbeeebbeeeebbbbeeeeebbbbbebbeeeeebbeeebeeeeeeeeeeeeeeeebeeee:
Contact : b b bbb bb b b b
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