Protein Model on 8ajl_A_1_B_1
(TEMPLATE: 
8ajl
)Protein Model on 8ajl_A_1_B_1
(TEMPLATE: 8ajl
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | A 1 (A) | polymer(polypeptide(L)) [1109 aa] | Spike glycoprotein,Fibritin :SPIKE_SARS2:WAC_BPT4 | |
| 2 | b | B 1 (C) | polymer(polypeptide(L)) [1109 aa] | Spike glycoprotein,Fibritin :SPIKE_SARS2:WAC_BPT4 | 45E(D) 47F 110K(T) 112Q 191D 192G 193F 221K 225G 227N 268E 269N 353S 356Y 357N 360F(S) 361F 362S 364F 371A(P) 372T 414D 489I 717S 722M 727D 729T 732A(S) 733N 736L 737Q 738Y 740S 741F 747R 768K 769Q 770M 771Y 772K 779F 816M 818Q 819Y 824G 825D 826I 829R 831L 834A 836K 837F 838N 843L 844P 845P 846L 847L 851M 854A 855Y 865T 868W 871G 872A 876L 877Q 878I 879P 880F 882M 886Y 895Q 896N 899Y 900E 902Q 945V 948L 949S 957S 958V 960N 963L 964S 965R 966L 967D 970E 976D 984Q 987Q 991T 994L 995I 1001R 1012S 1013E 1016L 1017G 1021R 1126E (identity: 95.1 %/87.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8ajl_A_1 identity=87.6% |
queryA 19:CTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINH------TFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQ: 112
:* * ** ** ** ******* ***** * **** **** **** * * ** *** ** ********** *** **** * **:
8ajl_A_1 2:CGTLSNKSPPNMTQFSSSRRGVYYPDDIFRSDVLHLTQDYFLPFNSNVTRYLSLNSDSDRIVRFDNPIIPFGDGVYFAATEKSNVIRGWIFGSTLDNTSQ: 101
SecStr : SB EEEESS EE SS S EEEEEEEE TTEEEEEEEEE SS TTSBEE EE S EEEEEEESS EEEEEEESS STTSE:
ExpBur :bbeeeeebeeeeeebebbebbbbbbeeeebbeeeeebeeebbbbebebbbbbbeeeeeeeebbbbbeebebeebbbbbbbbebbbbbbbbbbbebeeeee:
Contact : b b b b
queryA 113:SVIIINNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSG: 212
:* ** **** *** *** *** * **** * * * * ** *** ** * * ****** ************* **** ** ** **** * ****:
8ajl_A_1 102:SAIIMNNSTHIVIRVCNFQLCDDPMFAVSRPTGQHYKTWIYTNARNCTYEYVSKSFQLDVSEKPGNFKHLREFVFKNVDGFLHVYSGYEPIDVARGLPSG: 201
SecStr :EEEEEE SSSEEEEEEEEEEEEEEEEEEESSS S SEEEEEEEE EEEE SSEEEEEEEEEEEETTEEEEEEEEEEEEESSS :
ExpBur :bbbbbbbbeeebbebbebebbebbbbbbbeeeebeeeebbeeeeeeeeeeeebeeeeeebebeeeebeebbbbbbbeeeeebbbbbbeeebeeeebbbee:
Contact : bbb
queryA 213:FNTLKPIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGD: 312
:* ***************** * * *** ** ***************** ************** ** **** **** *********** * :
8ajl_A_1 202:FSVLKPIFKLPLGINITNFRVIMTMFSPTTSNWGAEAAAYFVGYLKPTTFMLKFDENGTITDAVDCSQDPLSELKCTVKSFNVEKGIYQTSNFRVSPTKE: 301
SecStr : EEEEEEEE S EEEEEEEEEESSSSS B SEEEEEEE EEEEEEEEE TT EEEEEETTS HHHHHHHHTTSS SEEEE S SE:
ExpBur :ebebeeebebebebebeebbbbbbbbbeeeeebbbbebbbbbbebeebbbbbebeeebebeebbbbbbebbbbbbbeeeebebeebeeebeebbbeeeee:
Contact : b b b bb
queryA 313:VVRFPNITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKL: 412
:******************** ********* ** ************ ********** ********* *******************************:
8ajl_A_1 302:VVRFPNITNLCPFGEVFNATTFPSVYAWERTRISDCVADYSVLYNSTSFSTFKCYGVSPTKLNDLCFSSVYADSFVVKGDDVRQIAPGQTGVIADYNYKL: 401
SecStr :EEE B THHHHHT SS BGGG EEEEE SEE GGGGTTT SEEEEESS TTGGGG EESEEEEEEEEEETTGGGGSSTT SHHHHHT :
ExpBur :bbbbeeeeeebebeebbeeeebbbbebbeeeebeebbbbbeebeeeeebeeeebeebeeeebebbbbbbbebbbbbbbeebbebbbeeeebebbbebbeb:
Contact : b bb bbb b bb
queryA 413:PDDFMGCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCG: 512
:**** *** **** * ********** ** ****** ************* ******** *** *** *** * *************************:
8ajl_A_1 402:PDDFTGCVIAWNTANLDATSTGNYNYYYRSLRHGKLKPFERDISNVPFSPEGKPCTPPAFNCYRPLNTYGFNPTVGIGYQPYRVVVLSFELLNAPATVCG: 501
SecStr : TT EEEEEEE HHHHTSSGGG EEE SS TT B SSSS SS TT B SEEE TTS TTTSEEEEEEEEEE SS EE :
ExpBur :beebebbbbbbebbeebbeeeeeeebebbbeeeeebeeeeebeeeeebbeeeeebeeeeeebeebbeebebeeeeeeeeebbbbbbbbbeeeeeebbbbb:
Contact : b b
queryA 513:PKLSTDLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHA: 612
:***** * ******************* *************************** ********************* **************** *****:
8ajl_A_1 502:PKLSTELVKNQCVNFNFNGLTGTGVLTDSSKRFQPFQQFGRDVSDFTDSVRDPKTLEILDISPCSFGGVSVITPGTNTSSEVAVLYQDVNCTDVPTAIHA: 601
SecStr : TTSEEEEEETTEEEEEEEEE TT EEE TT EEEEE TTT EEEEE TT S EEEEE TTT EEEETT TTTHHHHTTT:
ExpBur :eeeeeeeeeeebbebbbbbeeeebbbeeeeeebeeeebbbeeeeeebebbbbbeeeebbebeebeeeebbbbbbbbeebeebbbbbeebebeebeeebbb:
queryA 613:DQLTPAWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVS: 712
:******** **** **************** ****************** ************* ****************** ********:
8ajl_A_1 602:DQLTPAWRVYSTGVNVFQTQAGCLIGAEHVNASYECDIPIGAGICASYHTXXXXXXXXQKSIVAYTMSLGAENSIAYSNNTIAIPTNFSISVTTEVMPVS: 701
SecStr :TTS HHHHGGGSSSSEEE SSSEEESSEE SS B SEEEETTEEEEEE -------- EEEEEEB S TTEEEEEEEEEEEEEEEEEE :
ExpBur :eebeeebeebbeeeeebebeebbbbebeeeeeeeeeebebeeebbbbeee--------eeebbbbeeeeeeeeeeeeeeeeeebbeebebebebebbbbb:
queryA 713:MAKTSVDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLAD: 812
:******** ********** ********************* *** **************** * ************* ********************:
8ajl_A_1 702:MAKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALSGIAVEQDKNTREVFAQVKQMYKTPAIKDFGGFNFSQILPDPSKPTKRSFIEDLLFNKVTLAD: 801
SecStr : EEEE HHHHHHTT HHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHHTT S EETTEEGGGTSB TTSSS SBHHHHHHHHHS SS:
ExpBur :bbbbebebeebbbeebeebbebbeeeeeebeebeebbeebbebbbebbeebbeebeeeeeebeebebeebebeebbbeeeeeeebbebbbbbbeebeeee:
Contact : b b b b bb bbb bb b bbbbb b
queryA 813:AGFMKQYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKA: 912
:************** ********************** **************************************************************:
8ajl_A_1 802:AGFMKQYGECLGDISARDLICAQKFNGLTVLPPLLTDEMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKA: 901
SecStr :SSS GGGGS GGG HHHHHHHTTEEEE SS HHHHHHHHHHHHHHHHHTTTHHHHSS HHHHHHHHHHHHT THHHHTTHHHHHHHHHHH:
ExpBur :eeeebeeeebeeeeeeeeeebebeeebbeeeeeebeeeebbeebbbbbbbbbebbeebeeeeeeeeebbebbbebbeebebeeebbeeeeeebbeebeeb:
Contact : b bb bbb b b b bbb bbbbb b bb b b bb bbbbb b b bb bb b
queryA 913:ISQIQESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMS:1012
:****************************************************************************************************:
8ajl_A_1 902:ISQIQESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMS:1001
SecStr :HHHHHHHHHH SSTTHHHHHHHHHHHHHHHHHHHGGG TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:
ExpBur :beebeeebeebeeebeebbebbeebbebbeebbeebeeeeebebbebebbeeeeeeeebeebbeebbebbbebbeebbeebeeebeebeebbeebbebbe:
Contact : b bb bb b bbbbb b b b b b bb b b
queryA 1013:ECVLGQSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVI:1112
:****************************************************************** ************ ********************:
8ajl_A_1 1002:ECVLGQSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVSNGTSWFITQRNFYSPQIITTDNTFVSGNCDVVI:1101
SecStr :HHTSS STTTTSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEES EESSSEEEEESSSEEEE SS EEEE TTS EE BTTTEEEEEETTSST:
ExpBur :ebbbbbbeeeebbbeeebbbbbbbbbbebbbbbbbbbeebeeeebebbebbbeeeebbbbeebbbbbeeeebbbbbeebbbeeebbeeebeeeeebeeee:
Contact :b bb b
queryA 1113:GIINNTVYDPLQPELD:1128
:****************:
8ajl_A_1 1102:GIINNTVYDPLQPELD:1117
SecStr :T EE B TTGGG :
ExpBur :eeeeeebeeeeeeeee:
Contact : b
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[assembly_id:1]
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