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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(SPIKE_SARS) | C 1 (C) | polymer(polypeptide(L)) [962 aa] | Spike glycoprotein,Fibritin :SPIKE_SARS:WAC_BPT4 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [926 aa] | Spike glycoprotein,Fibritin :SPIKE_SARS:WAC_BPT4 | 304N 306R 533T 535T 544R 545F 546Q 548F 549Q 550Q 551F 552G 553R 554D 556S 558F 573I 575P 576C 577S 578F 600D 651P 653G 654A 655G 681L 683A 685S 686S 687I 688A 689Y 690S 691N 693T 694I 695A 697P 939Q 943T 946K 947Q 950S 951N 953G 992Q 999E 1021R 1022V 1023D 1027K 1028G 1029Y 1054E 1059T 1060A 1061P 1071F 1072P 1073R 1089R 1103F 1105S 1112I (identity: 100.0 %/88.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7zh5_C_1 identity=88.3% |
queryA 31:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 130 :**************************************** **************************************************: 7zh5_C_1 18:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHXXXXXXXXXXIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 117 SecStr : EEEESS B SSS S EEEEEEEE SSEEEE B ---------- B S EEEEEE SSS EEEESS SSSS EEEEEESSSSEEEEEE : ExpBur :eebebbebbbbbbeeeeeeeeeeebeeebbbbeeebebee----------eebeebbbbbbbbeeeebebbbbbeeeeeeeebbbbeeeeeeeeeeeeee: queryA 131:ELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 230 :* **************************************************: 7zh5_C_1 118:EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 217 SecStr : ------------------------------------------------- EEEEEEEE SS EEEEEEEE SSS S BEEEEEE E: ExpBur :e-------------------------------------------------ebebbbbbeeeeebebbebeeebeeeebbbeeebbbeeeeeeebebebee: queryA 231:FRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 330 :******** ********************************************************************** *****: 7zh5_C_1 218:FRAILTAFXXXXXXXXXSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPXXXXXXXXGEVFN: 317 SecStr :EE --------- EEEEE EEEEEEEEE TTSSEEEEEETTS HHHHHHHHHT SS SEEEEEEEEEB EEEEE -------- SSS: ExpBur :bbeeeeee---------eeebebbbebeebebbbebeeebebeebbbbebebbbbbebeeeeeebeebeeebeebebeeebebebee--------eeeee: Contact : b b queryA 331:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 430 :****************************************************************************************************: 7zh5_C_1 318:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 417 SecStr : S STT EEE SS TTSSS SEEEESS SSSSSSS BSSEEEEEEEE GGGTTT SS SSGGGS SSSEEEEEEEE SSS : ExpBur :eeebebeebbeeeebeeeeeebebbeeeeeeeeeeeeebeeeebeeeebbbbbbbbbbbbbebeeebeeeeebeebbebbbebeeebbbbbbbbbeeebb: queryA 431:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 530 :***************************** ************************************ **************: 7zh5_C_1 418:TSTGNYNYKYRYLRHGKLRPFERDISNVPXXXXXXXXXXXXXXXXWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCXXXXXTDLIKNQCVNFNFN: 517 SecStr : TT B SSEEES SS SS S ---------------- EEE B TTS TTTS EEEEEEE SSSSSSB ----- SS EEEEET: ExpBur :eeebbeebeebeebeeebeeeeebeeeee----------------eebebbebeeebeeeebbbbbbbbbbbeeeeeeebb-----eeeeeeebbebebe: queryA 531:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 630 :****************************************************************************************************: 7zh5_C_1 518:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 617 SecStr :TEEEEEEEEE TT EE TTSSEEEEE TTT EEEEE EEEEEEEE SSS EEEE S HHHHHHHTTTT BSS SS S B : ExpBur :ebeeebebeeeeeebeeeeeebeeeeeeeebbebeeeeebbebeeebeebbbbbbebeeeeeebbbbbeebebeebeebeeeeebebebeeeebeeeeee: Contact : b b bbb bbbbbbb b b b bbbb b queryA 631:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 730 :******************************** **********************************************************: 7zh5_C_1 618:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXXXSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 717 SecStr : SSSEEES EE S B SEEETTTEEEE ---------- EEEEB S SSEEE EEEEEEEEEEE EEE HHHHSSTT HH: ExpBur :beebbbbebeeeeeeeebebebeeebbbbeee----------ebbbbeeeeeeeeeeeeeeeeeebbbebebebeeebbbbbbebbebebeebbbeebee: Contact : b bbb b b bbbbbbb bbb b queryA 731:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 830 :********************************************************************************* : 7zh5_C_1 718:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLAXXXXXXXXXXXXXXXXXXX: 817 SecStr :HHHHHHTT SHHHHHHHHHHHHHHHHHHHHHHHH SS S BTTB TTSS SSSSSSS HHHHHHHHHS -------------------: ExpBur :beebbeeeeeebeebeeebeebbebbeebbeebbeebeeeeeeeeebebebbebeebbbeeebeeeebebbebbbebbeee-------------------: queryA 831:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 930 : ***************************************************************************************************: 7zh5_C_1 818:XICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 917 SecStr :- TT EEE SS HHHHHHHHHHHHHHHHSS TT SSSS SHHHHHHHHHTTT THHHHHSHHHHHHHHHHHHHHHHHHHHH SSTTHHH: ExpBur :-eeeeeebebeeeeeeeeeeebbeebbbbbbbbbebbbebeeeeeeeeebeebbbebbeebebeeebbeeeeeebbeebeebbeebbeebeeeeeebeeb: queryA 931:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1030 :****************************************************************************************************: 7zh5_C_1 918:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1017 SecStr :HHHHHHHHHHHHHHHHTTT SSSS SSTTSSTTT SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS STTTSSSSEE: ExpBur :eebeeebeeeeeebeeebeeeeebeeeebeebbeebeeeebeebbeebbebbbebbeebbeebeebbeebeeebeebbebbeebbbeebeeeebbbeeeb: Contact : b b bb bb b b b bbb bbb queryA 1031:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTV:1119 :*****************************************************************************************: 7zh5_C_1 1018:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTV:1106 SecStr :EEEEEEEETTEEEEEEEEEEE EEE S EESSSEEEEESSSEEE BTTB EEE SSS EE TTTEEEEEESSS SS EE : ExpBur :bbbbbbbbeebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbeeeeebbbbbebbbeeeebeeeebeeeeeeeeeeeeeebee: Contact : b bbb bbb b b b b |