Protein Model on 7zh5_A_1_B_1
(TEMPLATE: 
7zh5
)Protein Model on 7zh5_A_1_B_1
(TEMPLATE: 7zh5
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[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | A 1 (A) | polymer(polypeptide(L)) [904 aa] | Spike glycoprotein,Fibritin :SPIKE_SARS:WAC_BPT4 | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [926 aa] | Spike glycoprotein,Fibritin :SPIKE_SARS:WAC_BPT4 | 42Y 44D 45E 46I 47F 48R 110K 189N 191D 192G 193F 221K 223P 224L 225G 226I 227N 269N 719D 737Q 738Y 739G 740S 741F 744Q 747R 750S 768K 769Q 770M 771Y 772K 776L 779F 833C 835Q 836K 837F 839G 841T 845P 846L 847L 848T 851M 854A 855Y 865T 866A 872A 874A 876L 877Q 878I 879P 882M 886Y 895Q 896N 899Y 900E 902Q 945V 948L 949S 957S 958V 960N 964S 965R 966L 967D 970E 976D 987Q 1001R 1012S 1013E 1021R (identity: 100.0 %/83.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7zh5_A_1 identity=83.1% |
queryA 32:QHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNFE: 131
:*************************************** ************** ***************** ***********:
7zh5_A_1 19:QHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHXXXXXXXXPVIPFKDGIYFAATXXXXXXXXWVFGSTMNNKSQSVIIIXXXTNVVIRACNFE: 118
SecStr : EEESS EE SS SSEEEEEEEE TTEEEB -------- EE SS EEEEE -------- EEESSSSTTS EEB --- EEEES :
ExpBur :eeebbebbbbeeeeeeeeeebeebeeebbbbebebebee--------eebebeebbbbbee--------bbbbeeeeeebebbebe---eebebebbbee:
Contact : b bbbbb b
queryA 132:LCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITNF: 231
:* ************ ********************* ***********************:
7zh5_A_1 119:LXXXXXXXXXXXXXXXXXXXXXDNAFNCTFEYISXXXXXXXXXXXXXXXXLREFVFKNKDGFLYVYKGYQPXXXXXXLPSGFNTLKPIFKLPLGINITNF: 218
SecStr : --------------------- S EEEE ---------------- EEEEEEEETTEEEEEEEE ------ SS EEEEEEEEE EE:
ExpBur :e---------------------ebeeeeeeeeee----------------bebbbbbeeeeebebbebeee------eeeeeebbeeeeebebeeebeeb:
Contact : b bbb b bbbbb
queryA 232:RAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFNA: 331
:**** *********************************************************************************:
7zh5_A_1 219:RAILXXXXXXXXXXXXXXXAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFNA: 318
SecStr :E --------------- B EEEEEEEE TT EEEETTS HHHHHHHHHT SS SEEEEEEEEEB EEE TTTTTT :
ExpBur :ebee---------------ebbbbebeebebbbebeeebebeebbbbebebbbbbebeeeeeebeeeeeebeebebeeeeebbbbeeeeeebeeeeebee:
Contact : b
queryA 332:TKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDAT: 431
: *********** *********************************** **************** :
7zh5_A_1 319:XXXXXXXXXXRKKISNCVADYXXXXXXXXXXXXXCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGXXXXXXXXXXXLPDDFMGCVLAWNTRNXXXX: 418
SecStr :---------- EEE SB ------------- SS GGGGGG BSSEEEE GGGGGG S ----------- SS EEE ----:
ExpBur :----------eeebeebebee-------------eeeeeeeebeeebbbebebbeeeeeeeeeeeeeee-----------eeeeeebbeeeeeeee----:
queryA 432:STGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFNG: 531
: *************** ******** *************************************:
7zh5_A_1 419:XXXXXXXKYRYLRHGKLRPFERXXXXXXXXXXXXXXXXXXXXXXXXLNDYGFYTXXXXXXXXXRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFNG: 518
SecStr :------- B S SS SS ------------------------ B --------- EEEE BSSSS B SS EEEE SS:
ExpBur :-------eeeeeeeeeeeeeee------------------------eeeeeeee---------ebbbbbbeeeeeebebbbeeeeeeeeeeebbebbbbe:
queryA 532:LTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQT: 631
:****************************************************************************************************:
7zh5_A_1 519:LTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQT: 618
SecStr : EEEEEEEE TT B TTS EEETTTEEEEEETTS EEEEEEEE SSS S EEEESS SSHHHHHHHHT BSS SS EEEET:
ExpBur :beeebebeeeeeebeeeeeebeeeeeeeebbebeeeebbebeeeebebbbbbbbbbbeeeeebbbbbeebebeebeebeeeeebebebeeeeeeeeeebe:
queryA 632:QAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTEC: 731
:******************************* ***********************************************************:
7zh5_A_1 619:QAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXXXSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTEC: 718
SecStr :TTEEEES EEEEEEE SEEETTTEEEES ---------- EEEEE SS EEEEEEEEEEEEEEEEE EEE HHHHSS S SHH:
ExpBur :ebbbbbebeeeeeeeeeebebeeebbbbeee----------ebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbebebeebbbeebeeb:
Contact : b
queryA 732:ANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARDL: 831
:******************************************************************************** *:
7zh5_A_1 719:ANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLAXXXXXXXXXXXXXXXXXXXL: 818
SecStr :HHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHHH SS S EETTEE TTSS TTSSS S HHHHHTTTTS ------------------- :
ExpBur :beebeeeeeebeebeeebeebbebbbebbeebbeebeeeeeeeeebebeebebeebbbeeeeeeebbebbebbeeebeee-------------------e:
Contact : bbbbb b b b bbbbb b b
queryA 832:ICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKLQ: 931
:****************************************************************************************************:
7zh5_A_1 819:ICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKLQ: 918
SecStr : TT EEE SS HHHHHHHHHHHHHHHHTTTT SSSS SSHHHHHHHHHTT SHHHHHSHHHHHHHHHHHHHHHHHHHHT S SSHHHH:
ExpBur :eeeeeebebeeeeeebeeeebbeebbbbbbbbbebbeebeeeeeeeeebbebbbebbeebebeeebbeeeeeebbeebeebbeebeeebeeeeeebeebe:
Contact : b bbb b b bbbb b bb bb b b bbbb b b bb bb b
queryA 932:DVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHL:1031
:****************************************************************************************************:
7zh5_A_1 919:DVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHL:1018
SecStr :HHHHHHHHHHHHHHHGGG SSSS SSTTTSSSS SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS STTTSSSS :
ExpBur :ebeeebeebeeebeeeeeeeeebebeebeebbeeeeeeebeebbeebbebbbebbeebbeebeebbeebeebbeebbebbeebbbbbbeeeebbbeeebb:
Contact : b bb bb b bbbb b b b b bb b
queryA 1032:MSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTV:1119
:****************************************************************************************:
7zh5_A_1 1019:MSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTV:1106
SecStr :EEEEEEETTEEEEEEEEEEEEEEEEE S EESSS EEEESSSEEE SSS EEE SSS B TTTEE S SSSS TT :
ExpBur :bbbbbbbeebbbbbbbbbeeeeeeebebbebbbeeeebbeeeebbbbeeeeeebbbbeebbeeeebeeeebeeeeeeeebeeeeebbe:
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[assembly_id:1]
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