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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(SPIKE_SARS) | C 1 (C) | polymer(polypeptide(L)) [1020 aa] | Spike glycoprotein,Fibritin :SPIKE_SARS:WAC_BPT4 | |
2 | b | A 1 (A) | polymer(polypeptide(L)) [1020 aa] | Spike glycoprotein,Fibritin :SPIKE_SARS:WAC_BPT4 | 45E 46I 47F 51T 110K 112Q 189N 191D 192G 193F 217K 223P 224L 225G 226I 269N 356Y 357N 360F 361F 362S 364F 371A 372T 375N 414D 489I 717S 719D 721N 722M 726G 727D 737Q 738Y 739G 741F 743T 744Q 768K 769Q 770M 771Y 772K 779F 815F 816M 817K 818Q 819Y 823L 826I 827N 829R 836K 837F 839G 841T 842V 843L 845P 846L 847L 848T 851M 854A 855Y 865T 875A 876L 877Q 878I 879P 880F 882M 894T 895Q 896N 899Y 945V 948L 949S 957S 958V 960N 961D 963L 964S 965R 966L 967D 970E 987Q 1001R 1012S 1013E 1021R (identity: 100.0 %/94.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7zh2_C_1 identity=94.7% |
queryA 30:YTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACN: 129 :*********************************************** ****************************************************: 7zh2_C_1 17:YTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFDNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACN: 116 SecStr : EEEEESS EE SS SEEEEEEEEE TTEEEEEEEE SS B EE SS EEEEEEESS EEEEEEESSSSTTS EEEEEE SS EEEEEEE: ExpBur :eeebebbebbbbbeeeeebbeeeeebeeebbbbeeebebbebeeeeeebeebebeebbbbbbbbeeebbbbbbbbbebeeeeebbbbbeeeebebbebbb: Contact : bbb b b b queryA 130:FELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINIT: 229 :*********** ****************** ****************************************************: 7zh2_C_1 117:FELCDNPFFAVXXXXXXXXXTMIFDNAFNCTFEYISDAXXXXXXXXXXNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINIT: 216 SecStr :EEEEEEEE B --------- EEEEEEES EEE ---------- EEEEEEEEEETTEEEEEEEEEE SSS EEEEEEEE : ExpBur :beeeeebebee---------eebeeeeeeeeeeeeeee----------ebeebebbbbbeeeeebebbebeeebeeeeebbeeeebbeeeeebebebebe: Contact : b bbb b bbbb queryA 230:NFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVF: 329 :********* ************************************************************************************: 7zh2_C_1 217:NFRAILTAFXXXXXXXGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVF: 316 SecStr :EEEEEE B ------- SEEEEEEE EEEEEEEEE TTS EEEEEETTS HHHHHHHHHT S SEEEEE EEEE SB HHHHH: ExpBur :ebbbbbbee-------ebeebbbbbbebeebebbbebeeebebeebbbbeeebbbebbbeeeebebeebeeebeebeeeeebebbbbeeeeeebebeebb: Contact : b queryA 330:NATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNID: 429 :****************************************************************************************************: 7zh2_C_1 317:NATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNID: 416 SecStr :T S BSTT EEEE SEE STHHHH SEEEESSS GGGSSS EEEEEEEEEEEEEGGGGGGSSSS SHHHHHT TT EEEEEEE HHHH: ExpBur :eeeebbbbeebeeeebeebebeeeebeeeeeeeeeebeebeeeebeebbbbebebbbbbbbeebbebbbeeeeeebbbebbebbeebebbbbbbebeeeb: Contact : bb bbb b bb b b queryA 430:ATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNF: 529 :****************************************************************************************************: 7zh2_C_1 417:ATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNF: 516 SecStr : BSS B EEE SS TT B SSS SSSTT B SEEE BBTTS GGGSEEEEEEEEEEESSS EE S SSEEEEEE: ExpBur :beeebbeebebbeeeeeebeeeeeeeeeeebbeeeeebeeeeeebeebbeebbbeeeeeebebbbbbbbebbebeeeebebbbeeeeeeeeeeebbebbb: Contact : b queryA 530:NGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVF: 629 :*************************************************************************** ************: 7zh2_C_1 517:NGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTXXXXXXXXXXXXXAWRIYSTGNNVF: 616 SecStr :TTEEEEEEEEE TT EEE TT EEEEE TTT EEEEE S EEEEES TTT S EEEETT ------------- S S EE: ExpBur :bbeeeebbbeebeeebeeeebbbeeeeeeeebbbbeeeeebbebeebeebbbbbbbbbbeeeeebbbbbeebebe-------------eeebeeeeeeee: queryA 630:QTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDST: 729 :******************************** **********************************************************: 7zh2_C_1 617:QTQAGCLIGAEHVDTSYECDIPIGAGICASYHXXXXXXXXXXKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDST: 716 SecStr :EETTEEEES EE SS B SEEEETTEEEEE ---------- EEEEEB SSEEEEEEEEEEEEEEEEEE EEEE HHHHSSTT H: ExpBur :ebebbbbbebeeeeeeeebebebeeebbbbee----------eebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbebebeebbbeebe: Contact : b b bb bb queryA 730:ECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINAR: 829 :****************************************************************************************************: 7zh2_C_1 717:ECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINAR: 816 SecStr :HHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHTT SS S EETTEE TTSS SSSS SS HHHHHHHHHS S S S HHHHHHTTTS : ExpBur :ebeebbeeeeeebeebeeebeebbeebebbbeebbeebeeeeeeeeebebeebebeebbeeeebeeeebebbebbbeebeeeeeeeeeeeeebeeeeeee: Contact : bbb b bb bbbbb b bbbbb b bb b queryA 830:DLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGK: 929 :************************************* ********************************************************: 7zh2_C_1 817:DLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAXXXXXXXAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGK: 916 SecStr : HHHHHHTTTEEEE SS HHHHHHHHHHHHHHHTT ------- TTHHHHHHHHHHT HHHHHHTHHHHHHHHHHHHHHHHHHHHS STTHH: ExpBur :eeebebeeebbeeeeeeeeeeebbeebbbbbbbbbee-------eeeeeebbebbbebbeebebeeebbeeeeeebbeebeebbeebbeebeeeeeebee: Contact : bb b bbb bbbb b bb b bbbbbb b bbb b queryA 930:LQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGY:1029 :****************************************************************************************************: 7zh2_C_1 917:LQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGY:1016 SecStr :HHHHHHHHHHHHHHHHHGGG SSSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS STTSS SSE: ExpBur :beebbeebeebbeebeeebeeeeebebbebeebeeebeeeebeebbeebbebbbebbeebbeebeeebeebeeebeebbebbeebbeeebeeeebbbeee: Contact : b bb bb bb bbbbb b b b bb b queryA 1030:HLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVS:1105 :****************************************************************************: 7zh2_C_1 1017:HLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVS:1092 SecStr :EEEEEEEEETTEEEEEEEEEEEEEEEEEEE S B TTTS EE SSSEEEE SSSEEEE SSS B GGG EE : ExpBur :bbbbbbbbbbebbbbbbbbbeeeeeeebeebeebeeeeeebeeeebbbbeeeeeebbbeeeebeeeeeeeeebeee: |