Protein Model on 7sg4_A_1_M_1 (TEMPLATE: 7sg4 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(SPIKE_SARS) A 1 (A) polymer(polypeptide(L)) [1095 aa] Spike glycoprotein :SPIKE_SARS
2 b M 1 (A) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 691N (identity: 100.0 %/99.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7sg4_A_1 identity=99.8%
queryA        35:SSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNFELCD: 134
                :****************************************************************************************************:
7sg4_A_1      35:SSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNFELCD: 134
SecStr          :  S  EE  SS   SS EEEEEEEE  TT   EEEEEETTB     EE TT EEEEEEESS SS EEEEESSSSSSS EEEEEE SSSEEEE       S:    
ExpBur          :ebebbbbbbeeeeeeeeeeebebbbbbbeeebeeeebeeeeeebeebebeebbbbbbbbebbbbebbbbbbebeeeeebbbbbbbebbbbbbbbbbebee:    

queryA       135:NPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITNFRAI: 234
                :****************************************************************************************************:
7sg4_A_1     135:NPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITNFRAI: 234
SecStr          :S     B STTBTTTB B    S    EEE SSTTHHHHTSSSTTSEEEEEEEEEETTEEEEEEEEEE SSTT       EEEEEEEE       EEEEE:    
ExpBur          :ebeebebeeeeeeeeebbbeebeeeeeeeebeeebeebeeeeebbebbbbbbbbeeeeebebbbbbeebeeeeebeeeebbbeeebebebebebeebbbb:    

queryA       235:LTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFNATKF: 334
                :****************************************************************************************************:
7sg4_A_1     235:LTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFNATKF: 334
SecStr          : TT   SS SSSSSEEEEEEEE EEEEEEEEE TTS EEEEEETTSSHHHHHHHHTT S   SEEEEEEEEE    EEEE   S   B  HHHHH  SS :    
ExpBur          :bbeeebeeeeeebebbbbbbbebeebebbbebeeeeebeebbbbebebbbbbebeeeebebeebeeebeebeeeeeeebebbeeeeeebebeebbeeeeb:    

queryA       335:PSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDATSTG: 434
                :****************************************************************************************************:
7sg4_A_1     335:PSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDATSTG: 434
SecStr          :  TTT EEEEE SEE THHHHHH S  SEEEESSS HHHHTT EESEEEEEEEEE GGGGGG STT  STTGGGTT   TTSEEEEEEEE TTTT BTT :    
ExpBur          :bbbeebeeeebeebebebeebeeeeebeeeeeeeeebeebbeeebbebbbbbbbbebebeeebbbeeeeebbbbbbbbbeebebbbbbebbeeebbeeeb:    

queryA       435:NYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFNGLTG: 534
                :****************************************************************************************************:
7sg4_A_1     435:NYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFNGLTG: 534
SecStr          :EEEEE     TT  STTTTT   SS  SSSS   SSSTT      EEEB TTS TTT  EEEEEEEEE  SS   EE         TTSEEEEESSS EE:    
ExpBur          :beebbbbbebeeeeeebebbbeeebebbeeeebeeeeeebeeeeeebbbeeebeeeebbebbbbbbbeeeeeeeebbbeeeeeeeeeeebbebebeeeee:    

queryA       535:TGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQTQAG: 634
                :****************************************************************************************************:
7sg4_A_1     535:TGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQTQAG: 634
SecStr          :EEEEEE      TT  EEE TTS EEEEE TTT  EEEEE   EEEEEEEE  TTT    EEEEES  GGGS      SS   TTTTTT    EEEETTE:    
ExpBur          :ebbbbeeeeebeeeeeebeeeeeeebbbbbeeeeebbebeebeebbbbbbbbbbeebebbbbbbeebebeebbebeeeeeebbbeebeebbbeeeebeeb:    

queryA       635:CLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTECANL: 734
                :****************************************************************************************************:
7sg4_A_1     635:CLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTECANL: 734
SecStr          :EEES EE SS    SEEEETTEEEEEEE  GGGGGGGEEEEEEE   S        SSEEEEEEEEEEEEEEEEEE     EEE HHHHHHTT HHHHHH:    
ExpBur          :bbbbbbebeeeeeeebebeeebbbbeeeeeeeeeeeeebbbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbebebeebbbeebeebeeb:    
Contact         :                                                        b                                           

queryA       735:LLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARDLICA: 834
                :****************************************************************************************************:
7sg4_A_1     735:LLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARDLICA: 834
SecStr          :HGGG THHHHHHHHHHHHHHHHHHHHHHHHTT SS     S  EETTEE TTTSB TTSSSSSBHHHHHHHHS B SSSB   TTS   S SS STT SS:    
ExpBur          :beeeeeebeebeeebeebbebbbebbeebbeebeeebeeeeebebebbebeebbbeeeeeeeebebbebbbeebbbeebbbbeeeeeeeeeeeeeeeebe:    

queryA       835:QKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKLQDVV: 934
                :****************************************************************************************************:
7sg4_A_1     835:QKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKLQDVV: 934
SecStr          : TTSSEEE   SS HHHHHHHHHHHHHHHHHHGGGGGTSS     HHHHHHHHHHHTT  THHHHTTHHHHHHHHHHHHHHHHHHHHH SGGGHHHHHHH:    
ExpBur          :beeebbebeeeebeeeebbeebbbbbbbbbebbebbeeeeeeeeebbebbbebbeebebeeebbeeeeeebbeebeebbeebbeebeeebeebeebbebb:    

queryA       935:NQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSF:1034
                :*********************************  *****************************************************************:
7sg4_A_1     935:NQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSF:1034
SecStr          :HHHHHHHHHHHHHHH  TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS   STTTSSSSEEEEEE:    
ExpBur          :eebbebbeebeeeeeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeebbeebbebbeebbbeebeeeebbbeeebbbbb:    

queryA      1035:PQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPLQPELDS:1129
                :***********************************************************************************************:
7sg4_A_1    1035:PQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPLQPELDS:1129
SecStr          :EEEETTEEEEEEEEEEEEEEEEEEE S EE SSSEEEESSSEEEE SSSEEEE TTS   B  BTTTEEEES TTSSTT EE   B TTHHHHT :    
ExpBur          :bbbbbebbbbbbbbbeeeeeeebebbebbbeeeebbeeeeebbbeeeeebebbbebbbbeeebbeeebeeeeeeeeeeebeeeebeeeeeeeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123