Protein Model on 7sg4_A_1_C_1
(TEMPLATE: 
7sg4
)Protein Model on 7sg4_A_1_C_1
(TEMPLATE: 7sg4
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | A 1 (A) | polymer(polypeptide(L)) [1095 aa] | Spike glycoprotein :SPIKE_SARS | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [1095 aa] | Spike glycoprotein :SPIKE_SARS | 42Y 44D 45E 46I 47F 48R 218P 269N 270G 719D 722M 727D 737Q 738Y 739G 741F 744Q 747R 769Q 770M 771Y 772K 779F 839G 845P 846L 847L 848T 851M 854A 855Y 865T 868W 871G 872A 875A 876L 877Q 878I 879P 880F 882M 886Y 894T 895Q 896N 899Y 900E 945V 948L 987Q 991T 994L 995I 1001R 1012S 1013E 1021R 1123L 1126E 1127L (identity: 100.0 %/99.8 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7sg4_A_1 identity=99.8% |
queryA 35:SSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNFELCD: 134
:****************************************************************************************************:
7sg4_A_1 35:SSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNFELCD: 134
SecStr : S EE SS SS EEEEEEEE TT EEEEEETTB EE TT EEEEEEESS SS EEEEESSSSSSS EEEEEE SSSEEEE S:
ExpBur :ebebbbbbbeeeeeeeeeeebebbbbbbeeebeeeebeeeeeebeebebeebbbbbbbbebbbbebbbbbbebeeeeebbbbbbbebbbbbbbbbbebee:
Contact : b bbbbb
queryA 135:NPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITNFRAI: 234
:****************************************************************************************************:
7sg4_A_1 135:NPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITNFRAI: 234
SecStr :S B STTBTTTB B S EEE SSTTHHHHTSSSTTSEEEEEEEEEETTEEEEEEEEEE SSTT EEEEEEEE EEEEE:
ExpBur :ebeebebeeeeeeeeebbbeebeeeeeeeebeeebeebeeeeebbebbbbbbbbeeeeebebbbbbeebeeeeebeeeebbbeeebebebebebeebbbb:
Contact : b
queryA 235:LTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFNATKF: 334
:****************************************************************************************************:
7sg4_A_1 235:LTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFNATKF: 334
SecStr : TT SS SSSSSEEEEEEEE EEEEEEEEE TTS EEEEEETTSSHHHHHHHHTT S SEEEEEEEEE EEEE S B HHHHH SS :
ExpBur :bbeeebeeeeeebebbbbbbbebeebebbbebeeeeebeebbbbebebbbbbebeeeebebeebeeebeebeeeeeeebebbeeeeeebebeebbeeeeb:
Contact : bb
queryA 335:PSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDATSTG: 434
:****************************************************************************************************:
7sg4_A_1 335:PSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDATSTG: 434
SecStr : TTT EEEEE SEE THHHHHH S SEEEESSS HHHHTT EESEEEEEEEEE GGGGGG STT STTGGGTT TTSEEEEEEEE TTTT BTT :
ExpBur :bbbeebeeeebeebebebeebeeeeebeeeeeeeeebeebbeeebbebbbbbbbbebebeeebbbeeeeebbbbbbbbbeebebbbbbebbeeebbeeeb:
queryA 435:NYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFNGLTG: 534
:****************************************************************************************************:
7sg4_A_1 435:NYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFNGLTG: 534
SecStr :EEEEE TT STTTTT SS SSSS SSSTT EEEB TTS TTT EEEEEEEEE SS EE TTSEEEEESSS EE:
ExpBur :beebbbbbebeeeeeebebbbeeebebbeeeebeeeeeebeeeeeebbbeeebeeeebbebbbbbbbeeeeeeeebbbeeeeeeeeeeebbebebeeeee:
queryA 535:TGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQTQAG: 634
:****************************************************************************************************:
7sg4_A_1 535:TGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQTQAG: 634
SecStr :EEEEEE TT EEE TTS EEEEE TTT EEEEE EEEEEEEE TTT EEEEES GGGS SS TTTTTT EEEETTE:
ExpBur :ebbbbeeeeebeeeeeebeeeeeeebbbbbeeeeebbebeebeebbbbbbbbbbeebebbbbbbeebebeebbebeeeeeebbbeebeebbbeeeebeeb:
queryA 635:CLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTECANL: 734
:****************************************************************************************************:
7sg4_A_1 635:CLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTECANL: 734
SecStr :EEES EE SS SEEEETTEEEEEEE GGGGGGGEEEEEEE S SSEEEEEEEEEEEEEEEEEE EEE HHHHHHTT HHHHHH:
ExpBur :bbbbbbebeeeeeeebebeeebbbbeeeeeeeeeeeeebbbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbebebeebbbeebeebeeb:
Contact : b b b
queryA 735:LLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARDLICA: 834
:****************************************************************************************************:
7sg4_A_1 735:LLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARDLICA: 834
SecStr :HGGG THHHHHHHHHHHHHHHHHHHHHHHHTT SS S EETTEE TTTSB TTSSSSSBHHHHHHHHS B SSSB TTS S SS STT SS:
ExpBur :beeeeeebeebeeebeebbebbbebbeebbeebeeebeeeeebebebbebeebbbeeeeeeeebebbebbbeebbbeebbbbeeeeeeeeeeeeeeeebe:
Contact : bbb b b b bbbb b
queryA 835:QKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKLQDVV: 934
:****************************************************************************************************:
7sg4_A_1 835:QKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKLQDVV: 934
SecStr : TTSSEEE SS HHHHHHHHHHHHHHHHHHGGGGGTSS HHHHHHHHHHHTT THHHHTTHHHHHHHHHHHHHHHHHHHHH SGGGHHHHHHH:
ExpBur :beeebbebeeeebeeeebbeebbbbbbbbbebbebbeeeeeeeeebbebbbebbeebebeeebbeeeeeebbeebeebbeebbeebeeebeebeebbebb:
Contact : b bbbb b bb b b bb bbbbbb b b bbb bb
queryA 935:NQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSF:1034
:********************************* *****************************************************************:
7sg4_A_1 935:NQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSF:1034
SecStr :HHHHHHHHHHHHHHH TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS STTTSSSSEEEEEE:
ExpBur :eebbebbeebeeeeeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeebbeebbebbeebbbeebeeeebbbeeebbbbb:
Contact : b b b b bb b bb b
queryA 1035:PQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPLQPELDS:1129
:***********************************************************************************************:
7sg4_A_1 1035:PQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPLQPELDS:1129
SecStr :EEEETTEEEEEEEEEEEEEEEEEEE S EE SSSEEEESSSEEEE SSSEEEE TTS B BTTTEEEES TTSSTT EE B TTHHHHT :
ExpBur :bbbbbebbbbbbbbbeeeeeeebebbebbbeeeebbeeeeebbbeeeeebebbbebbbbeeebbeeebeeeeeeeeeeebeeeebeeeeeeeeee:
Contact : b bb
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