Protein Model on 7sg4_A_1_B_1
(TEMPLATE: 
7sg4
)Protein Model on 7sg4_A_1_B_1
(TEMPLATE: 7sg4
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | A 1 (A) | polymer(polypeptide(L)) [1095 aa] | Spike glycoprotein :SPIKE_SARS | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [1095 aa] | Spike glycoprotein :SPIKE_SARS | 304N 306R 544R 546Q 548F 549Q 550Q 551F 552G 553R 556S 558F 575P 578F 600D 632Q 651P 653G 654A 655G 656I 678T 679M 681L 682G 683A 684D 685S 687I 688A 689Y 690S 691N 693T 694I 695A 697P 939Q 943T 947Q 950S 951N 952F 953G 984Q 991T 992Q 995I 999E 1021R 1022V 1028G 1029Y 1054E 1056N 1059T 1061P 1071F 1072P 1073R 1075G 1076V 1089R 1103F 1105S 1110V 1112I 1123L 1127L (identity: 100.0 %/99.8 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7sg4_A_1 identity=99.8% |
queryA 35:SSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNFELCD: 134
:****************************************************************************************************:
7sg4_A_1 35:SSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNFELCD: 134
SecStr : S EE SS SS EEEEEEEE TT EEEEEETTB EE TT EEEEEEESS SS EEEEESSSSSSS EEEEEE SSSEEEE S:
ExpBur :ebebbbbbbeeeeeeeeeeebebbbbbbeeebeeeebeeeeeebeebebeebbbbbbbbebbbbebbbbbbebeeeeebbbbbbbebbbbbbbbbbebee:
queryA 135:NPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITNFRAI: 234
:****************************************************************************************************:
7sg4_A_1 135:NPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITNFRAI: 234
SecStr :S B STTBTTTB B S EEE SSTTHHHHTSSSTTSEEEEEEEEEETTEEEEEEEEEE SSTT EEEEEEEE EEEEE:
ExpBur :ebeebebeeeeeeeeebbbeebeeeeeeeebeeebeebeeeeebbebbbbbbbbeeeeebebbbbbeebeeeeebeeeebbbeeebebebebebeebbbb:
queryA 235:LTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFNATKF: 334
:****************************************************************************************************:
7sg4_A_1 235:LTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFNATKF: 334
SecStr : TT SS SSSSSEEEEEEEE EEEEEEEEE TTS EEEEEETTSSHHHHHHHHTT S SEEEEEEEEE EEEE S B HHHHH SS :
ExpBur :bbeeebeeeeeebebbbbbbbebeebebbbebeeeeebeebbbbebebbbbbebeeeebebeebeeebeebeeeeeeebebbeeeeeebebeebbeeeeb:
Contact : b b
queryA 335:PSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDATSTG: 434
:****************************************************************************************************:
7sg4_A_1 335:PSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDATSTG: 434
SecStr : TTT EEEEE SEE THHHHHH S SEEEESSS HHHHTT EESEEEEEEEEE GGGGGG STT STTGGGTT TTSEEEEEEEE TTTT BTT :
ExpBur :bbbeebeeeebeebebebeebeeeeebeeeeeeeeebeebbeeebbebbbbbbbbebebeeebbbeeeeebbbbbbbbbeebebbbbbebbeeebbeeeb:
queryA 435:NYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFNGLTG: 534
:****************************************************************************************************:
7sg4_A_1 435:NYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFNGLTG: 534
SecStr :EEEEE TT STTTTT SS SSSS SSSTT EEEB TTS TTT EEEEEEEEE SS EE TTSEEEEESSS EE:
ExpBur :beebbbbbebeeeeeebebbbeeebebbeeeebeeeeeebeeeeeebbbeeebeeeebbebbbbbbbeeeeeeeebbbeeeeeeeeeeebbebebeeeee:
queryA 535:TGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQTQAG: 634
:****************************************************************************************************:
7sg4_A_1 535:TGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQTQAG: 634
SecStr :EEEEEE TT EEE TTS EEEEE TTT EEEEE EEEEEEEE TTT EEEEES GGGS SS TTTTTT EEEETTE:
ExpBur :ebbbbeeeeebeeeeeebeeeeeeebbbbbeeeeebbebeebeebbbbbbbbbbeebebbbbbbeebebeebbebeeeeeebbbeebeebbbeeeebeeb:
Contact : b b bbbbbb b b b b b b
queryA 635:CLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTECANL: 734
:****************************************************************************************************:
7sg4_A_1 635:CLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTECANL: 734
SecStr :EEES EE SS SEEEETTEEEEEEE GGGGGGGEEEEEEE S SSEEEEEEEEEEEEEEEEEE EEE HHHHHHTT HHHHHH:
ExpBur :bbbbbbebeeeeeeebebeeebbbbeeeeeeeeeeeeebbbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbebebeebbbeebeebeeb:
Contact : b bbbb bb bbbbb bbbbb bbb b
queryA 735:LLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARDLICA: 834
:****************************************************************************************************:
7sg4_A_1 735:LLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARDLICA: 834
SecStr :HGGG THHHHHHHHHHHHHHHHHHHHHHHHTT SS S EETTEE TTTSB TTSSSSSBHHHHHHHHS B SSSB TTS S SS STT SS:
ExpBur :beeeeeebeebeeebeebbebbbebbeebbeebeeebeeeeebebebbebeebbbeeeeeeeebebbebbbeebbbeebbbbeeeeeeeeeeeeeeeebe:
queryA 835:QKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKLQDVV: 934
:****************************************************************************************************:
7sg4_A_1 835:QKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKLQDVV: 934
SecStr : TTSSEEE SS HHHHHHHHHHHHHHHHHHGGGGGTSS HHHHHHHHHHHTT THHHHTTHHHHHHHHHHHHHHHHHHHHH SGGGHHHHHHH:
ExpBur :beeebbebeeeebeeeebbeebbbbbbbbbebbebbeeeeeeeeebbebbbebbeebebeeebbeeeeeebbeebeebbeebbeebeeebeebeebbebb:
queryA 935:NQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSF:1034
:********************************* *****************************************************************:
7sg4_A_1 935:NQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSF:1034
SecStr :HHHHHHHHHHHHHHH TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS STTTSSSSEEEEEE:
ExpBur :eebbebbeebeeeeeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeebbeebbebbeebbbeebeeeebbbeeebbbbb:
Contact : b b b bbbb b bb b b bb bb
queryA 1035:PQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPLQPELDS:1129
:***********************************************************************************************:
7sg4_A_1 1035:PQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPLQPELDS:1129
SecStr :EEEETTEEEEEEEEEEEEEEEEEEE S EE SSSEEEESSSEEEE SSSEEEE TTS B BTTTEEEES TTSSTT EE B TTHHHHT :
ExpBur :bbbbbebbbbbbbbbeeeeeeebebbebbbeeeebbeeeeebbbeeeeebebbbebbbbeeebbeeebeeeeeeeeeeebeeeebeeeeeeeeee:
Contact : b b b b bbb bb b b b b b b b
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[assembly_id:1]
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