Protein Model on 7akj_A_1_G_1
(TEMPLATE: 
7akj
)Protein Model on 7akj_A_1_G_1
(TEMPLATE: 7akj
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | A 1 (C) | polymer(polypeptide(L)) [1084 aa] | Spike glycoprotein :Q5DIC5_CVHSA | |
| 2 | b | G 1 (A) | polymer(polypeptide(L)) [1084 aa] | Spike glycoprotein :Q5DIC5_CVHSA | 368G 369V 370S 373K 383Y 449R 450P 451F 452E 453R 455I 456S 458V 502E 504L 505N 533T 544R 545F 548F 549Q 551F 552G 553R 556S 557D 575P 577S 578F 600D 651P 653G 654A 655G 679M 681L 682G 683A 685S 686S 687I 688A 689Y 690S 691N 693T 694I 695A 697P 939Q 943T 952F 984Q 995I 999E 1021R 1022V 1059T 1071F 1072P 1076V 1089R 1103F 1105S 1106G 1110V 1111V 1112I (identity: 100.0 %/97.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7akj_A_1 identity=97.3% |
queryA 18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
:*********************************************************** ****************************************:
7akj_A_1 1:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFDNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 100
SecStr : TT EEEE TT B SS S EEEEEEEE TT EEEEEEE TT EE TT EEEEEEESS EEEEEEESS SSSS EEEEE:
ExpBur :eeeebeeeeeeeeeeeebbebbbbeeeeeeeeeeeeebeebbbbbebebebbebeeeebbbeebebeebbbbbbbbbbebbbbbbbbeebeeeeebbbbb:
queryA 118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
:****************************************************************************************************:
7akj_A_1 101:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 200
SecStr : SS EEEEE EEEEEEEEE TTT EEEEEEES S EEE SS EEEEEEEEEETTEEEEEEEEEE SS BE:
ExpBur :eeeeebebebbbbebbebbbbbbbeeeeeeeeeebeeeeeeeeeeeeeeeeeeebeeeeeebeebebbbbbeeeeebebbebeeeeeeeeebbeeeeebe:
queryA 218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
:********************** *************************************************************************:
7akj_A_1 201:PIFKLPLGINITNFRAILTAFSXXXXTWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 300
SecStr :EEEEE EEEEEEEEE ---- B EEEEEEE EEEEEEEEE TTS EEEEEETTSSHHHHHHHHHT S SEEEEEEEEEE EEE :
ExpBur :eeeebebeeebeebbbbbbbbe----eeebeebbbbbbebeebebbbebeeebebeebbbbebebbbebebeeeeeebeeeeeeeeebebeeebebbbbe:
queryA 318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
:****************************************************************************************************:
7akj_A_1 301:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 400
SecStr : B THHHHT S GGG EEEEE S B SHHHHS S SEEEE SS GGGGGG EESEEEEEEEEEEGGGGGGSSTT SHHHHTT TT :
ExpBur :eeeeebebeebbeeeebeebebbeeeebeebeeebeeeeeeeeeeeeeeeebebeebbeebbbbbebbbbbbbbeeeebbeeeeeeebbbebbebeeebe:
Contact : bbb b b
queryA 418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
:****************************************************************************************************:
7akj_A_1 401:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 500
SecStr :EEEEEEE HHHH SS EEEEEEE SS TT B TTSS TTSTT B SEEEEEE TT TTTSEEEEEEEEEE SS EE :
ExpBur :bbbbbbebeeebbeeebeeebeebeeeeeebeeeeeeeeeeebbeeeeebeeeeeebeebbeeebbeeebeeeebbbbbbbbebeeeeeebbbbbeeeee:
Contact : bbbbb bb b b bb
queryA 518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
:****************************************************************************************************:
7akj_A_1 501:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 600
SecStr : TTSEEEEESSS EEEEE EE TT EEE GGG EEEEE TTT EEE EEEEEEEE TTT EEEEET HHHHHHHHGGG EES:
ExpBur :ebeeeebbebbbbeeeeebebeeeeeebeeeebeeeeeeeeeebbebeeeeebbebeebeeebbbbbbbbeeeeeebbbbbeebebeebeebeeeeebee:
Contact : b bb bb bbb bb b bb b
queryA 618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
:********************************************** ***********************************************:
7akj_A_1 601:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVXXXXXXXQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 700
SecStr : SS S EEEETTEEEES EE S SEEEETTEEEEEEE ------- EEEEEEE S SSEEEEEEEEEEEEEEEEEE EE:
ExpBur :ebeeeeeeeeeeebeebbbbebeeeeeeeeeebebeeebbbbeeee-------eebbbbbeeeeeeeeeeeeeeeeeebeeebebebeeebbbbbbebbe:
Contact : b bbb b bbb bbbbbbb bbb b
queryA 718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
:******************************************************************************************* :
7akj_A_1 701:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVXXXXXXXXX: 800
SecStr :E HHHHHTTT STTHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHH SS S EETTEE TTTS SSSS S HHHHHHHHH ---------:
ExpBur :bebeebbbeebeebeeebeeeeeebeebeeebeebbebbeebbeebbeebeeeeeeeeebeeebbebeebbbeeeeeeeebebbebbeeee---------:
queryA 818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
:******* ***************************************************************************************:
7akj_A_1 801:QYGECLGXXXXXXLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 900
SecStr : BB ------ B TT EEE SS HHHHHHHHHHHHHHHHHTTTGGGSSS HHHHHHHHHHTTT THHHHHTHHHHHHHHHHHHHHHH:
ExpBur :eebeeee------eeeeeeebbbebeeeebeeeebbeebbbbbbbbbebbebbeeeeeeeeebeebbbebbeeeebeeebbeeeeeebbeebeebbeebe:
queryA 918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
:************************************************** ************************************************:
7akj_A_1 901:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1000
SecStr :HHHHH SGGGHHHHHHHHHHHHHHHHHHHGGG TT S S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS:
ExpBur :eebeebeeebeebeebeeebeebbeebeeeeeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeeebeebbebbeebbee:
Contact : b b b b b b
queryA 1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
:****************************************************************************************************:
7akj_A_1 1001:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1100
SecStr : STTTSSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEE S EEETTEEEEESSSEEEE SSSEEEE SSS B BGGGEEE S GGGSSS EE :
ExpBur :ebeeeebbbeeebbbbbbbbbeebbbbbbbbbeeeeeeebebbebbbeeeebbeeeebebbeeeeebebbbeeeebeeebbeeebeeeeebeeeeeeeee:
Contact : bb b bb b b b bb bbb
queryA 1118:TVYDPLQPEL:1127
:**********:
7akj_A_1 1101:TVYDPLQPEL:1110
SecStr : B TTTTT :
ExpBur :ebeeeeeeee:
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[assembly_id:1]
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