Protein Model on 7akj_A_1_B_1
(TEMPLATE: 
7akj
)Protein Model on 7akj_A_1_B_1
(TEMPLATE: 7akj
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | A 1 (C) | polymer(polypeptide(L)) [1084 aa] | Spike glycoprotein :Q5DIC5_CVHSA | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [1084 aa] | Spike glycoprotein :Q5DIC5_CVHSA | 45E 46I 47F 110K 112Q 189N 191D 192G 193F 221K 225G 226I 227N 271T 722M 737Q 744Q 747R 769Q 770M 771Y 772K 779F 835Q 836K 837F 841T 845P 846L 848T 851M 855Y 865T 868W 876L 877Q 878I 879P 882M 886Y 894T 895Q 896N 899Y 900E 945V 948L 958V 960N 963L 964S 965R 966L 967D 987Q 995I 1001R 1012S 1013E 1021R (identity: 100.0 %/97.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7akj_A_1 identity=97.3% |
queryA 18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
:*********************************************************** ****************************************:
7akj_A_1 1:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFDNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 100
SecStr : TT EEEE TT B SS S EEEEEEEE TT EEEEEEE TT EE TT EEEEEEESS EEEEEEESS SSSS EEEEE:
ExpBur :eeeebeeeeeeeeeeeebbebbbbeeeeeeeeeeeeebeebbbbbebebebbebeeeebbbeebebeebbbbbbbbbbebbbbbbbbeebeeeeebbbbb:
Contact : bbb b b
queryA 118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
:****************************************************************************************************:
7akj_A_1 101:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 200
SecStr : SS EEEEE EEEEEEEEE TTT EEEEEEES S EEE SS EEEEEEEEEETTEEEEEEEEEE SS BE:
ExpBur :eeeeebebebbbbebbebbbbbbbeeeeeeeeeebeeeeeeeeeeeeeeeeeeebeeeeeebeebebbbbbeeeeebebbebeeeeeeeeebbeeeeebe:
Contact : b bbb
queryA 218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
:********************** *************************************************************************:
7akj_A_1 201:PIFKLPLGINITNFRAILTAFSXXXXTWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 300
SecStr :EEEEE EEEEEEEEE ---- B EEEEEEE EEEEEEEEE TTS EEEEEETTSSHHHHHHHHHT S SEEEEEEEEEE EEE :
ExpBur :eeeebebeeebeebbbbbbbbe----eeebeebbbbbbebeebebbbebeeebebeebbbbebebbbebebeeeeeebeeeeeeeeebebeeebebbbbe:
Contact : b bbb b
queryA 318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
:****************************************************************************************************:
7akj_A_1 301:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 400
SecStr : B THHHHT S GGG EEEEE S B SHHHHS S SEEEE SS GGGGGG EESEEEEEEEEEEGGGGGGSSTT SHHHHTT TT :
ExpBur :eeeeebebeebbeeeebeebebbeeeebeebeeebeeeeeeeeeeeeeeeebebeebbeebbbbbebbbbbbbbeeeebbeeeeeeebbbebbebeeebe:
queryA 418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
:****************************************************************************************************:
7akj_A_1 401:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 500
SecStr :EEEEEEE HHHH SS EEEEEEE SS TT B TTSS TTSTT B SEEEEEE TT TTTSEEEEEEEEEE SS EE :
ExpBur :bbbbbbebeeebbeeebeeebeebeeeeeebeeeeeeeeeeebbeeeeebeeeeeebeebbeeebbeeebeeeebbbbbbbbebeeeeeebbbbbeeeee:
queryA 518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
:****************************************************************************************************:
7akj_A_1 501:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 600
SecStr : TTSEEEEESSS EEEEE EE TT EEE GGG EEEEE TTT EEE EEEEEEEE TTT EEEEET HHHHHHHHGGG EES:
ExpBur :ebeeeebbebbbbeeeeebebeeeeeebeeeebeeeeeeeeeebbebeeeeebbebeebeeebbbbbbbbeeeeeebbbbbeebebeebeebeeeeebee:
queryA 618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
:********************************************** ***********************************************:
7akj_A_1 601:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVXXXXXXXQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 700
SecStr : SS S EEEETTEEEES EE S SEEEETTEEEEEEE ------- EEEEEEE S SSEEEEEEEEEEEEEEEEEE EE:
ExpBur :ebeeeeeeeeeeebeebbbbebeeeeeeeeeebebeeebbbbeeee-------eebbbbbeeeeeeeeeeeeeeeeeebeeebebebeeebbbbbbebbe:
queryA 718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
:******************************************************************************************* :
7akj_A_1 701:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVXXXXXXXXX: 800
SecStr :E HHHHHTTT STTHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHH SS S EETTEE TTTS SSSS S HHHHHHHHH ---------:
ExpBur :bebeebbbeebeebeeebeeeeeebeebeeebeebbebbeebbeebbeebeeeeeeeeebeeebbebeebbbeeeeeeeebebbebbeeee---------:
Contact : b b b b bbbb b
queryA 818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
:******* ***************************************************************************************:
7akj_A_1 801:QYGECLGXXXXXXLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 900
SecStr : BB ------ B TT EEE SS HHHHHHHHHHHHHHHHHTTTGGGSSS HHHHHHHHHHTTT THHHHHTHHHHHHHHHHHHHHHH:
ExpBur :eebeeee------eeeeeeebbbebeeeebeeeebbeebbbbbbbbbebbebbeeeeeeeeebeebbbebbeeeebeeebbeeeeeebbeebeebbeebe:
Contact : bbb b bb b b b b b bbbb b b bbb bb
queryA 918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
:************************************************** ************************************************:
7akj_A_1 901:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1000
SecStr :HHHHH SGGGHHHHHHHHHHHHHHHHHHHGGG TT S S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS:
ExpBur :eebeebeeebeebeebeeebeebbeebeeeeeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeeebeebbebbeebbee:
Contact : b b b b bbbbb b b b bb
queryA 1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
:****************************************************************************************************:
7akj_A_1 1001:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1100
SecStr : STTTSSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEE S EEETTEEEEESSSEEEE SSSEEEE SSS B BGGGEEE S GGGSSS EE :
ExpBur :ebeeeebbbeeebbbbbbbbbeebbbbbbbbbeeeeeeebebbebbbeeeebbeeeebebbeeeeebebbbeeeebeeebbeeebeeeeebeeeeeeeee:
Contact : b
queryA 1118:TVYDPLQPEL:1127
:**********:
7akj_A_1 1101:TVYDPLQPEL:1110
SecStr : B TTTTT :
ExpBur :ebeeeeeeee:
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[assembly_id:1]
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