Protein Model on 6nb7_C_1_B_1
(TEMPLATE: 
6nb7
)Protein Model on 6nb7_C_1_B_1
(TEMPLATE: 6nb7
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | C 1 (C) | polymer(polypeptide(L)) [1048 aa] | Spike glycoprotein :SPIKE_CVHSA | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [1032 aa] | Spike glycoprotein :SPIKE_CVHSA | 306R 543K 544R 545F 548F 549Q 550Q 551F 552G 553R 573I 574S 575P 578F 651P 653G 654A 655G 656I 657C 679M 681L 682G 683A 685S 688A 689Y 690S 693T 694I 695A 697P 943T 947Q 951N 952F 977R 988T 999E 1021R 1022V 1059T 1061P 1071F 1072P 1076V 1089R 1103F (identity: 100.0 %/94.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6nb7_C_1 identity=94.1% |
queryA 18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
:**** *********************************************** ****************************************:
6nb7_C_1 37:RCTTXXXXXXXXYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFDNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 136
SecStr : -------- EEE TT EE SS SEEEEEEEEE TT EEEEEEEBTTB EE TTEEEEEEEESS EEEEESS STTS EEEEE:
ExpBur :eeee--------eeebebbbebbbeeeeeeeeeeeeeeeebbbebeeebebbeeeeeeeeeeeeebeebbbbbbbbeeebebbeeebeeeeeeeebeeee:
queryA 118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
:******************** ******************** ***************************************:
6nb7_C_1 137:NNSTNVVIRACNFELCDNPFXXXXXXXXXXXHTMIFDNAFNCTFEYISDAFXXXXXXXXXXFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 236
SecStr :E SSSEEEEEE B SS ----------- SBS S EEEE ---------- EEEEEEEEEETTEEEEEEEEEE SSS EEE:
ExpBur :eeeebeeebbbbbbebeeee-----------eebebeeeeeeeeeeeeeee----------eeebbbebebeeeeeeebbbeebebebeeebeeeeeebe:
queryA 218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
:********************* ***********************************************************************:
6nb7_C_1 237:PIFKLPLGINITNFRAILTAFXXXXXXXXTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 336
SecStr :EEEEEE SEEEEE -------- EEEEEEE EEEEEEEEE TTS EEEEEETTS HHHHHHHHTT S SEEEEEEEEEE SEEEE :
ExpBur :eeeeeebeeebebbbbbeeee--------eeeeebbebebeeeebbbbbbeebebeebbbbebbeebbbebeeeeeeeeebeeeeeebeeeeeeebebbe:
Contact : b
queryA 318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
:****************************************************************************************************:
6nb7_C_1 337:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 436
SecStr :S B THHHHS S BSTT EEEEE SEE HHHHSSSS SEEEESSS GGGGGG BSEEEEEEEEEEGGGGGGSSTT SHHHHHT SS :
ExpBur :eeeeeeeeeeeeeeeeeebbbebeeeebeebbeebeeeeeeeebeeeeebeeeeeeeeeeebbbebeeebbbeeeeeebeeeeeeeebbebbbbeeeeeb:
queryA 418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
:****************************************************************************************************:
6nb7_C_1 437:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 536
SecStr : EEEEEE TTTT BTT BTT EEE SS TT B TTS TTSTT B SEEE BBTTS GGGSEEEEEEEEEE SS EE :
ExpBur :beeebbebbeeebeeeebeebbbbeeeeeebeeebeeeeeeebbeeeeeeeeeeeebeebeeebebbeeeeeebbbbbeeeeeeeeeeeeeebeeeeeee:
queryA 518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
:****************************************************************************************************:
6nb7_C_1 537:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 636
SecStr : SSEEEEEETTEEEEEEEEE TT SEEE SSSSEEEEE TTT EEEEE EEEEEEEE TTT EEEEET HHHHHHHHHTT EES:
ExpBur :eeeeeebbebeeeeeeeebbbeeeeeeebeebeeeeeeeeeeebbebebeeebbeeeebeeebbbbbebbeeebeeebbbeeebebeeeeebeeeebeee:
Contact : bbb bbbbbb bbb b
queryA 618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
:********************************************** ***********************************************:
6nb7_C_1 637:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVXXXXXXXQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 736
SecStr : SS S EEEETTEEEES EE S SEEEETTEEEEEEE ------- EEEEEEE S SSEEEEES EEEEEEEEEEE EEE:
ExpBur :eeeeeeeeeeeeebeebbbbebeeeeeeeeeebeeeeebbebeeee-------eeebbbbeeeeeeeeeeeeeeeeeebeeebebebeeebbbbbbebbe:
Contact : b bbbbb b bbb b bbb bbb b
queryA 718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
:******************************************************************************************* :
6nb7_C_1 737:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVXXXXXXXXX: 836
SecStr :E HHHHH S TTTHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHH SS S EETTEE TTTSB TTSSS SBHHHHHHHTT ---------:
ExpBur :bebeebbbeeeeebeebbeeeeeebeebeeebeebeebbeebbeebbeebeeeeeeeeebeeebbebeebbbeeeeeeeebebbebbbeee---------:
queryA 818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
: ***** **************************************************************************************:
6nb7_C_1 837:XYGECLXXXXXXXXICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 936
SecStr :- BEE -------- EE SSSEEEE SS HHHHHHHHHHHHHHHHHHGGGTTTSS HHHHHHHHHHHHT HHHHHHTHHHHHHHHHHHHHHHH:
ExpBur :-ebeee--------eeeeeeeebeeeeeebeeeebbeebbbbbbbbeebbebbeeeeeeeeebebbbbebbeeeebebebbeeeeebbbeebeebbeebe:
queryA 918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
:************************************************** ************************************************:
6nb7_C_1 937:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1036
SecStr :HHHHT SSTTHHHHHHHHHHHHHHHHHHHGGG TTSS S THHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS:
ExpBur :eeeeeeeeebeebbeeeeebeebeeebeeebeeeeebeebebeebeeeeeeeebeeebeebbebbbebbeebbeebeebbeebeebbeebbebbebbbbb:
Contact : b b bb b b b
queryA 1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
:****************************************************************************************************:
6nb7_C_1 1037:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1136
SecStr : STTSS SSEEEEEEEEEETTEEEEEEEEEEE EEEEEE SEEEETTEEEEESSSEEEEETTEEEEE TTS B BTTSEEEEEESSSSTTEEE :
ExpBur :bbeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeebebeebebbbeeebbeeeeeeebbeeeeeeebbeeeeeeeeebbeeebeeeeeeeeeeeeeee:
Contact : bb b b bb b b b
queryA 1118:TVYDPLQPEL:1127
:**********:
6nb7_C_1 1137:TVYDPLQPEL:1146
SecStr : B TTTTT :
ExpBur :ebeeeeeeee:
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[assembly_id:1]
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