Protein Model on 6cs0_B_1_A_1
(TEMPLATE: 
6cs0
)Protein Model on 6cs0_B_1_A_1
(TEMPLATE: 6cs0
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | B 1 (B) | polymer(polypeptide(L)) [1068 aa] | Spike glycoprotein,Fibritin :SPIKE_CVHSA:D9IEJ2_BPT4 | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [1068 aa] | Spike glycoprotein,Fibritin :SPIKE_CVHSA:D9IEJ2_BPT4 | 42Y 45E 46I 47F 84K 85D 110K 112Q 129N 158N 159C 160T 189N 191D 192G 193F 217K 218P 223P 225G 226I 227N 269N 270G 719D 722M 727D 737Q 738Y 741F 744Q 768K 769Q 770M 771Y 772K 779F 818Q 822C 831L 833C 835Q 836K 837F 838N 841T 843L 844P 845P 846L 847L 848T 851M 854A 855Y 865T 868W 875A 876L 877Q 878I 879P 882M 886Y 894T 895Q 896N 899Y 902Q 946K 965R 966L 967D 968K(P) 984Q 987Q 994L 995I 998A 1001R 1009T 1012S 1013E 1017G 1021R 1095Q (identity: 98.8 %/96.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6cs0_B_1 identity=96.6% |
queryA 18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
:****************************************************************************************************:
6cs0_B_1 5:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 104
SecStr : S B EEEEE S SS S EEEEEEEE TTEEEEEEEE TTB S EE TTEEEEEEEESS EEEEESSSSTTS EEEEE:
ExpBur :eeeebeeeeebeeeeeebbebbbbeeeeeeeeeeeeeeeeebbbbebebebbebeeebbbbeebebeebbbbbbbbbbbbbbbbbbbbebeeeeebbbbb:
Contact : b bbb bb b b
queryA 118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
:****************************************************************************************************:
6cs0_B_1 105:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 204
SecStr :E SS EEEEEE SS EEEEETTTTEEEE TT S S EEEE S SSEEEEEEEEEEEETTEEEEEEEEEEEEESSS E:
ExpBur :bebebbbbbbbebebbebbbbbbeeeebebeebbbbeebeeeeeeeebeeeeeebbeeeeebeebbbbbbbeeeeebbbbebeeebebeeebeeeebbbe:
Contact : b bbb b bbb b
queryA 218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
:*********************** **************************************************************************:
6cs0_B_1 205:PIFKLPLGINITNFRAILTAFSPXXXIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 304
SecStr :EEEEEE EEEEEEEEEE --- EEE EE EEEEEEEEE TT EEEEEESSS HHHHHHHHHTSS SEEEEEEEEEE EEE :
ExpBur :eeeebebebebeebbbbbbbbbe---ebbbbbbbbbbbebeebebbbebeeebebeebbbbebebbbbbebeeeeeebeebeeebeebebeeeeebbbbe:
Contact :b b bbb bb
queryA 318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
:************************************************** ***********************************************:
6cs0_B_1 305:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYXXXATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 404
SecStr : SSS IIIIIS S STT EEEEE SEE TTTTSSSSB EE --- THHHH EES EEEEEEEE STTTTT SSS TTTTTTTT B SSS :
ExpBur :eeeebbebeebbebeebebbeebeeeebeebebebeebeeeeebeeeebe---bebbeebeeeebebbbbbbbeebbebbbeeeeeebbbebbebbeeeb:
queryA 418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
:************************************************************************************* *********:
6cs0_B_1 405:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFEXXXXXXTVCGPKLST: 504
SecStr : EEEEEE HHHH SS B EEE SS BT B TT SS TT B SEEE B SSS GGGS EEEEEEE ------ EE :
ExpBur :bbbbbbebeeebbeeebbeebebbeeeeeebeeeeebeeeebbbeeeeebeeeeeebeebbeebbbeeeeeeeebbbbbbbbbbe------ebebbeeee:
queryA 518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
:*********************************************************** ****************************************:
6cs0_B_1 505:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCAFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 604
SecStr : SS EEEE SS EEEEEEEE TT EEE SSSSEEEEE TTT EEEEE EEEEEEEES TTT S EEEEES HHHHHHHHHTT EES:
ExpBur :eeeeeebbebebeebeeebbbeeeeeeeeeeeeeeeeeeeeebbbbbbeeeebbebeebbebbbbbbbbbeeeeeebbbbbeebebeebeebeeeebbee:
queryA 618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
:********************************************** **********************************************:
6cs0_B_1 605:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVXXXXXXXXKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 704
SecStr : SS TT EEE SSEEEES EEEEEEE SEEEETTEEEEEE -------- EEEEEEE S SSEEEE S EEEEEEEEE E:
ExpBur :ebeeeeeeeeeeebeebbbbebeeeeeeeeeebebeeebbbbeeee--------eebbbbeeeeeeeeeeeeeeeebebbeebebebeebbbbbbbbbbe:
queryA 718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
:******************************************************************************************** :
6cs0_B_1 705:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTXXXXXXXX: 804
SecStr :E HHHHTSSS HHHHHHHHHH S TTTTTTHHHHHHTHHHHHHHHHHTT SS S EETTEE TTTS TTSTTS HHHHHHHHHH --------:
ExpBur :bebeebbbbebeebeebbeeeeeebeebeeebeebbeebeebbeebbeebeeeeeeeeebeeebbebeebbbeeeeeeeebebbbebbeeee--------:
Contact : b b b bb b b bbbbb b
queryA 818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
:****** ***************************************************************************************:
6cs0_B_1 805:QYGECLXXXXXXXLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 904
SecStr : BEE ------- EE SS EE SS HHHHHHHHHHHHHHHHHHTTHHHHSS HHHHHHHHHHHTT HHHHHTTHHHHHHHHHHHHHHHH:
ExpBur :eebeee-------eeeeeeeebbebeeeebeeeebbeebbbbbbbbbebbebbeeeeeeeeebeebbbebbeebebeeebbeeeeeebbeebbebbeebe:
Contact :b b b b bbbb b bbbbbb b bb b b bbbbb b b bbb b b
queryA 918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
:************************************************** ************************************************:
6cs0_B_1 905:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1004
SecStr :HHHHH TTHHHHHHHHHHHHHHHHHHHGGG TTSS S HHHHHHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHTTTTTTTTTTTTTS:
ExpBur :eebeeebeebeebeebeeebeebbeebeeebeeeeebebbebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeeebeebbebbeebbbe:
Contact : b bbbb b b bb b b b bb b
queryA 1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
:****************************************************************************************************:
6cs0_B_1 1005:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1104
SecStr : TTSSSSSEEEEEE EETTEEEEEEEEEE EEEEEES EEETTEEEEESSSEEEE SS EEEEETTEEEEEE SSSEEE S TTSSTT EE :
ExpBur :ebeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeeeebeebebbbeeeebbeeeeebbbeeeeebbbbeeebebeeebeeeebeeeeebeeeeebbeb:
Contact : b b
queryA 1118:TVY:1120
:***:
6cs0_B_1 1105:TVY:1107
SecStr : :
ExpBur :ebe:
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[assembly_id:1]
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