Protein Model on 6crz_B_1_N_1 (TEMPLATE: 6crz )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(SPIKE_SARS) B 1 (B) polymer(polypeptide(L)) [1068 aa] Spike glycoprotein,Fibritin :SPIKE_CVHSA:D9IEJ2_BPT4
2 b N 1 (N) branched(oligosaccharide) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 778Y 783N 785S 786Q (identity: 100.0 %/96.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6crz_B_1 identity=96.6%
queryA        18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
                :****************************************************************************************************:
6crz_B_1       5:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 104
SecStr          :     S  B    EEEEE S      SS    S EEEEEEEE  TTEEEEEEEE TTB   S EE TTEEEEEEEESS    EEEEESSSSTTS EEEEE:    
ExpBur          :eeeebeeeeebeeeeeebbebbbbeeeeeeeeeeeeeeeeebbbbebebebbebeeebbbbeebebeebbbbbbbbbbbbbbbbbbbbebeeeeebbbbb:    

queryA       118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
                :****************************************************************************************************:
6crz_B_1     105:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 204
SecStr          :E SS EEEEEE     SS EEEEETTTTEEEE TT S   S  EEEE        S   SSEEEEEEEEEEEETTEEEEEEEEEEEEESSS        E:    
ExpBur          :bebebbbbbbbebebbebbbbbbeeeebebeebbbbeebeeeeeeeebeeeeeebbeeeeebeebbbbbbbeeeeebbbbebeeebebeeebeeeebbbe:    

queryA       218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
                :***********************   **************************************************************************:
6crz_B_1     205:PIFKLPLGINITNFRAILTAFSPXXXIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 304
SecStr          :EEEEEE      EEEEEEEEEE ---      EEE  EE EEEEEEEEE TT  EEEEEESSS HHHHHHHHHTSS   SEEEEEEEEEE    EEE   :    
ExpBur          :eeeebebebebeebbbbbbbbbe---ebbbbbbbbbbbebeebebbbebeeebebeebbbbebebbbbbebeeeeeebeebeeebeebebeeeeebbbbe:    

queryA       318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
                :**************************************************   ***********************************************:
6crz_B_1     305:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYXXXATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 404
SecStr          : SSS   IIIIIS S    STT EEEEE SEE   TTTTSSSSB   EE --- THHHH EES EEEEEEEE STTTTT SSS TTTTTTTT B  SSS :    
ExpBur          :eeeebbebeebbebeebebbeebeeeebeebebebeebeeeeebeeeebe---bebbeebeeeebebbbbbbbeebbebbbeeeeeebbbebbebbeeeb:    

queryA       418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
                :*************************************************************************************      *********:
6crz_B_1     405:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFEXXXXXXTVCGPKLST: 504
SecStr          : EEEEEE HHHH  SS B   EEE   SS   BT        B TT     SS TT B SEEE  B SSS GGGS EEEEEEE  ------ EE      :    
ExpBur          :bbbbbbebeeebbeeebbeebebbeeeeeebeeeeebeeeebbbeeeeebeeeeeebeebbeebbbeeeeeeeebbbbbbbbbbe------ebebbeeee:    

queryA       518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
                :*********************************************************** ****************************************:
6crz_B_1     505:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCAFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 604
SecStr          :    SS EEEE SS EEEEEEEE      TT  EEE SSSSEEEEE TTT  EEEEE   EEEEEEEES TTT S  EEEEES  HHHHHHHHHTT EES:    
ExpBur          :eeeeeebbebebeebeeebbbeeeeeeeeeeeeeeeeeeeeebbbbbbeeeebbebeebbebbbbbbbbbeeeeeebbbbbeebebeebeebeeeebbee:    

queryA       618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
                :**********************************************        **********************************************:
6crz_B_1     605:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVXXXXXXXXKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 704
SecStr          :  SS   TT EEE SSEEEES EEEEEEE  SEEEETTEEEEEE  -------- EEEEEEE  S        SSEEEE S  EEEEEEEEE       E:    
ExpBur          :ebeeeeeeeeeeebeebbbbebeeeeeeeeeebebeeebbbbeeee--------eebbbbeeeeeeeeeeeeeeeebebbeebebebeebbbbbbbbbbe:    

queryA       718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
                :********************************************************************************************        :
6crz_B_1     705:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTXXXXXXXX: 804
SecStr          :E HHHHTSSS HHHHHHHHHH S TTTTTTHHHHHHTHHHHHHHHHHTT SS     S  EETTEE TTTS  TTSTTS  HHHHHHHHHH --------:    
ExpBur          :bebeebbbbebeebeebbeeeeeebeebeeebeebbeebeebbeebbeebeeeeeeeeebeeebbebeebbbeeeeeeeebebbbebbeeee--------:    
Contact         :                                                            b    b bb                               

queryA       818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
                :******       ***************************************************************************************:
6crz_B_1     805:QYGECLXXXXXXXLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 904
SecStr          :  BEE -------  EE  SS EE    SS HHHHHHHHHHHHHHHHHHTTHHHHSS     HHHHHHHHHHHTT  HHHHHTTHHHHHHHHHHHHHHHH:    
ExpBur          :eebeee-------eeeeeeeebbebeeeebeeeebbeebbbbbbbbbebbebbeeeeeeeeebeebbbebbeebebeeebbeeeeeebbeebbebbeebe:    

queryA       918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
                :**************************************************  ************************************************:
6crz_B_1     905:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1004
SecStr          :HHHHH   TTHHHHHHHHHHHHHHHHHHHGGG  TTSS S HHHHHHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHTTTTTTTTTTTTTS:    
ExpBur          :eebeeebeebeebeebeeebeebbeebeeebeeeeebebbebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeeebeebbebbeebbbe:    

queryA      1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
                :****************************************************************************************************:
6crz_B_1    1005:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1104
SecStr          :    TTSSSSSEEEEEE  EETTEEEEEEEEEE    EEEEEES EEETTEEEEESSSEEEE SS EEEEETTEEEEEE  SSSEEE S TTSSTT EE :    
ExpBur          :ebeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeeeebeebebbbeeeebbeeeeebbbeeeeebbbbeeebebeeebeeeebeeeeebeeeeebbeb:    

queryA      1118:TVY:1120
                :***:
6crz_B_1    1105:TVY:1107
SecStr          :   :    
ExpBur          :ebe:

Input Residue Numbers for Focused Sites

ex) 2,15,123