Protein Model on 6crz_A_1_R_1 (TEMPLATE: 6crz )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(SPIKE_SARS) A 1 (A) polymer(polypeptide(L)) [1068 aa] Spike glycoprotein,Fibritin :SPIKE_CVHSA:D9IEJ2_BPT4
2 b R 1 (R) branched(oligosaccharide) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 831L (identity: 100.0 %/96.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6crz_A_1 identity=96.6%
queryA        18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
                :****************************************************************************************************:
6crz_A_1       5:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 104
SecStr          :     SS B    EEEEE S   B  SS    SEEEEEEEEE  SSEEEEEEEE TTB   S EE TT EEEEEEESS    EEEEESSSSSSS EEEEE:    
ExpBur          :ebeebeeeeeeeebeeebbebbbbbbeeeeeeeeeeebebbbbbbebebebbbbeeebbbbeebebeebbbbbbbbbbbbbbbbbbbeebeeeeebbbbb:    

queryA       118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
                :****************************************************************************************************:
6crz_A_1     105:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 204
SecStr          :E SS EEEEEEEEEE SS  EEEETTTTEEEE TTEEEEEEEEEEEE        S   SSEEEEEEEEEEEETTEEEEEEE  EEEESSS       BE:    
ExpBur          :bebeebbbbbbbbebeebbbbbbeeeebebeeebbbeebeeeeeeeebeeeeeebeeeeeebeebbbbbbbeeeeebbbbebeeebeeeebbeebeebbe:    

queryA       218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
                :***********************   **************************************************************************:
6crz_A_1     205:PIFKLPLGINITNFRAILTAFSPXXXIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 304
SecStr          :EEEEE   S   EEEEE EEE  ---      EEEEEEE EEEEEEEEE TTS EEEEEESSS HHHHHHHHHT SS  SEEEEEEEEEE    EEE  S:    
ExpBur          :eeeebebebebeebbbbbbbbbe---eebbbbbbbbbbebeebebbbebeeebebeebbbbebebbbebebeeeeeebeebeeebeebebeeeeebbbbe:    

queryA       318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
                :**************************************************   ***********************************************:
6crz_A_1     305:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYXXXATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 404
SecStr          :        HHHH       STT EEEEE S     HHHHS SS    EE --- GGGG  SSS EEEEEEEE GGGTTT SBS  STTTTTT  B  SS :    
ExpBur          :eeeeebebebbbeeeebebbbebeeeebeebbbebeebeeeeebeeeebe---eeeeebbbbebbbbbbbbbbeebeebbbeeeebebbbbbbbbbeeeb:    

queryA       418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
                :*************************************************************************************      *********:
6crz_A_1     405:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFEXXXXXXTVCGPKLST: 504
SecStr          : EEE  B TTTS BTT  TTSEEE   SS   SS      S   TTSSS  TTSTT   SEEE   BSSS GGG  EEEEEEEE ------   SS    :    
ExpBur          :bbbbbeebeeebbeeebbeeeebbeebeeebeeeeebeeeeebeeeeeebebeeeebeebeeebbbeeeeeeeebbbbbbbbbbe------ebbbebeee:    

queryA       518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
                :*********************************************************** ****************************************:
6crz_A_1     505:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCAFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 604
SecStr          :   TTSEEEEEETTEEEEEEEEE      TT  EE  SSSS  EEE TTT  EEEEE   EEEEEEEE  TTT S  EEEEES  HHHHHHHHHTT EES:    
ExpBur          :ebeeeebbebebeebeeebebeebeeebeeeeeebeeeeeebbbbbbbeeeeebebeebeebbbbbbbbbeeeeeebbbbbeebebeebeebeeeeebee:    

queryA       618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
                :*********************************************         **********************************************:
6crz_A_1     605:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXXKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 704
SecStr          :  SS    S EEE SSEEEESSEEEEEEE  SEE SSSEEEEEE --------- EEEEEEE  S        TT      EEEEEEEEEEEE    EEE:    
ExpBur          :ebeeeebeeeeeebebbbbbebeeeeeeeeeebebeeebbbbeee---------eebbbbeeeeeeeeeeeeeeeeeebbeebebebeebbbbbbbbbbe:    

queryA       718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
                :********************************************************************************************        :
6crz_A_1     705:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTXXXXXXXX: 804
SecStr          :E HHHHTTSS STTHHHHTTT SHHHHHHHHHHHHHHHHHHHHHHHH   SS     S  BSSS B TTTS  TTSSS   HHHHHHHHHH --------:    
ExpBur          :bebeebbbeebeebeebbeeeeeeeeebeeebeebbeebeebbeebbeebeeeeeebeeeebeebebebbbbeeebeeebbebbeebbeebe--------:    

queryA       818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
                :*******      ***************************************************************************************:
6crz_A_1     805:QYGECLGXXXXXXLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 904
SecStr          :  B    ------      SS EEEE  SS HHHHHHHHHHHHHHHHHTTHHHHHSS     HHHHHHHHHHTTTS THHHHHTHHHHHHHHHHHHHHHH:    
ExpBur          :eebeeee------eeeeeeebbbebeeeebeeeebbeebbbbbbbbbebbebbeeeeeeeeebeebbbebbeebebeeebbeeeeeebbebbeebbeebe:    
Contact         :             b                                                                                      

queryA       918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
                :**************************************************  ************************************************:
6crz_A_1     905:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1004
SecStr          :HHTTS SSS HHHHHHHHHHHHHHHHHHHTTS  TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSS:    
ExpBur          :eebeeeeeebeebeebeeebeebbeebeeeeeeeeebeeeebeebeeebeeeebeeebeebbebbbebbeebbeebeeebeebeeebeebbebbeebbeb:    

queryA      1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
                :****************************************************************************************************:
6crz_A_1    1005:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1104
SecStr          :   SSSSSSSSEEEEE  EEETTEEEEEEEEEEEE     EEESEEEETTEEEEESSSEEEE SS EEEE SSS   B   TTSEEEEEESSSSSSEEE :    
ExpBur          :bbeeeebbbeeebbbbbbbbbeebbbbbbbbbeeeeeeebebbebbbbeeebbeeeebbbbeeeeeebbbbebbeeeeebeeeebeeeeebeeeeebeeb:    

queryA      1118:TVY:1120
                :***:
6crz_A_1    1105:TVY:1107
SecStr          :   :    
ExpBur          :ebe:

Input Residue Numbers for Focused Sites

ex) 2,15,123