Protein Model on 6crx_B_1_L_1 (TEMPLATE: 6crx )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(SPIKE_SARS) B 1 (C) polymer(polypeptide(L)) [1069 aa] Spike glycoprotein,Fibritin :SPIKE_CVHSA:D9IEJ2_BPT4
2 b L 1 (L) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 227N (identity: 100.0 %/96.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6crx_B_1 identity=96.6%
queryA        18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
                :****************************************************************************************************:
6crx_B_1       5:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 104
SecStr          :      S B    EEEE TT  EE  SS    SSEEEEEEEE  TT EEEEEEESTTB   S EE TT EEEEEEESS  EEEEEEESSSSTTS EEEEE:    
ExpBur          :eeeebeeeeeeeeeebebbebbbbbbeeeeeeeeeeebeebbbbbebebebbbbeeebbbbeebebeebbbbbbbbbbebbbbbbbbeebeeeeebbbbb:    

queryA       118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
                :****************************************************************************************************:
6crx_B_1     105:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 204
SecStr          :E SS EEEEEEEEEEEEEEEEEEETTT  EEEEEEEEEEEEEEEEEE        S   SSEEEEEEEEEEEETTEEEEEEEEEEEEESSS      EEE:    
ExpBur          :bebeebbbebbbbebbeebbbbbbeeeeebeebbbbeeeeeeeeeeebeeeeeebbeeeeebeebebbbbbeeeeebebbebeeeeebeeebeeeebbbe:    

queryA       218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
                :***********************   **************************************************************************:
6crx_B_1     205:PIFKLPLGINITNFRAILTAFSPXXXIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 304
SecStr          :EEEEEE     SEEEEEEEEEE ---  B  SEEEEEEE EEEEEEEEE TTS EEEEEETTSSHHHHHHHHHT SS  SEEEEEEEEEE    EEE  S:    
ExpBur          :eeeebebebebeebbbbbbbbbe---eebbbbbbbbbbebeebebbbebeeebebeebbbbebebbbbbebeeeebebeebeeebeebebeeeeebbbbe:    
Contact         :         b                                                                                          

queryA       318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
                :**************************************************   ***********************************************:
6crx_B_1     305:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYXXXATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 404
SecStr          :S   B   HHHHS S    SSS B  EE S B   HHHHS SSBS  EE --- TTTTS  BSSEE EEEEEEHHHHTT SS  TTHHHHTT B  SS  :    
ExpBur          :eeeeeeebeebbebeebebbbebeeeebeebbbebeebeeeeebeebeee---eeebeebbeeebbbbbbbbbbebbebbbeeeeeebbbbbbebbeeeb:    

queryA       418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
                :*************************************************************************************      *********:
6crx_B_1     405:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFEXXXXXXTVCGPKLST: 504
SecStr          : EEEEEE TTTT  TT BTT EEE   SS   SSB     S B TTS    SSSTT B SEEE  B SSS GGGSEEEEEE  B ------ B SS    :    
ExpBur          :bbbbbbebeeebbeeebbeeeebbebeeeebeebeebeeeeebbeeeeebeeeeeebeebbeebbbebeeeeeebbbbbbbbbbe------ebbbebeee:    

queryA       518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
                :*********************************************************** ****************************************:
6crx_B_1     505:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCAFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 604
SecStr          :    SSEEEEE SS EEEEEEEE      TT  EEE SSSSEEEEE TTT  EEEEE   EEEEEEEE  TTT S  EEEEET  HHHHHHHHHTT EES:    
ExpBur          :ebeeeebbebebeebeeebbbeeeeeebeeeeeebeeeeeeeebbebeeeeeebebeebbeebbbbbbbbeeebeebbbbbeebebeebeebbeeebbee:    

queryA       618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
                :**********************************************        **********************************************:
6crx_B_1     605:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVXXXXXXXXKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 704
SecStr          :  SS   TT EEE SSEEEES EEEEEEE  SEEEETTEEEEEE  -------- EEEEEEE  S        SSEEEEEEEEEEEEEEEEEE     EE:    
ExpBur          :ebeeeebeeeeeebebbbbbebeeeeeeeeeebebeeebbbbeeee--------ebbbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbe:    

queryA       718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
                :********************************************************************************************        :
6crx_B_1     705:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTXXXXXXXX: 804
SecStr          :E HHHHHTSS HHHHHHHHTT THHHHHHHHHHHHHHHHHHHHHHHH   SS     S  EETTEE TTTS  TTSTTSS HHHHHHHHHH --------:    
ExpBur          :bebeebbbeebeebeebbeeeeeebeebeeebeebbeebbebbeebbeeeeeeeeeeeebebebbebbbbbbbeeeeeeebebbeebbeebe--------:    

queryA       818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
                :*******      ***************************************************************************************:
6crx_B_1     805:QYGECLGXXXXXXLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 904
SecStr          :  BEEE ------ EEE  SS EEE   SS HHHHHHHHHHHHHHHTTSTTHHHHSS     HHHHHHHHHHTTT  THHHHHTTTHHHHHHHHHHHHHH:    
ExpBur          :eebeeee------eeeeeeeebbebeeeebeeeebbeebbbbbbbbbebbeebeeeeeeeeebeebbbebbeebebeeebbeeeeeebbeebeebbeebe:    

queryA       918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
                :**************************************************  ************************************************:
6crx_B_1     905:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1004
SecStr          :HHHHH  SSSHHHHHHHHHHHHHHHHHHHTTS  TTSS S SHHHHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS:    
ExpBur          :eebeeeeeebeebeebeeebeebbeebbeebeeeeebeeeebeebeeeeeeeebeeebbebbebbbebbeebbeebeeebeebeebbeebbebbeebbbb:    

queryA      1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
                :****************************************************************************************************:
6crx_B_1    1005:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1104
SecStr          :    TTSSSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEEE SEEEETTEEEEESSSEEEE SS EEEE SSS   B   SSSEEEEEESSSSTTEE  :    
ExpBur          :bbeeeebbeeeebbbbbbbbbbebbbbbbbbbeeeeeeebebeebbbeeeebbeeeeebbbeeeeeebbbbeebebeeebeeeebeeeeebeeeeebbee:    

queryA      1118:TVY:1120
                :***:
6crx_B_1    1105:TVY:1107
SecStr          :   :    
ExpBur          :ebe:

Input Residue Numbers for Focused Sites

ex) 2,15,123