Protein Model on 6crx_A_1_BA_1 (TEMPLATE: 6crx )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(SPIKE_SARS) A 1 (B) polymer(polypeptide(L)) [1068 aa] Spike glycoprotein,Fibritin :SPIKE_CVHSA:D9IEJ2_BPT4
2 b BA 1 (b) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 877Q (identity: 100.0 %/96.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6crx_A_1 identity=96.6%
queryA        18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
                :****************************************************************************************************:
6crx_A_1       5:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 104
SecStr          :     SS      EEEE TT  EE  SS    SEEEEEEEEE  TT EEEEEEE TT     EEE TTEEEEEEEESS  EEEEEEESS STTS EEEEE:    
ExpBur          :eeeebeeeeeeeeeebebbbbbbbbeeeeeeeeeeeeeeebbbbbeeebebbebeeebbbbeebebeebbbbbbbbbbbbbbbbbbbeebeeeeebbbbb:    

queryA       118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
                :****************************************************************************************************:
6crx_A_1     105:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 204
SecStr          :E SS EEEEEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEEE        S   SSEEEEEEEEEEEETTEEEEEEEEEEEEE SS      EEE:    
ExpBur          :bebebeebebbbbebbeebbbbbeeeebebeebbbeeebeeeeeeeebeeeebebeeeeeebeebbbbbbbeeeeebbbbebeeebeeeeebbeeebbbe:    

queryA       218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
                :***********************   **************************************************************************:
6crx_A_1     205:PIFKLPLGINITNFRAILTAFSPXXXIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 304
SecStr          :EEEEEE     SEEEEEEEEEE ---     SEEEEEEE EEEEEEEEE TTS EEEEEESSS HHHHHHHHHT S   SEEEEEEEEEE    EEEE  :    
ExpBur          :eeeebebebebeebbbbbbbbbe---eebbbebbbbbbebeebebbbebeeebebeebbbbbbebbbebebeeeeeebeebeeebeebebeeeeebbbee:    

queryA       318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
                :**************************************************   ***********************************************:
6crx_A_1     305:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYXXXATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 404
SecStr          :SS SB  GGGTTS S    GGG EEEEE SEE   HHHHT S B   EE --- THHHH   SSEEEEEEEEEHHHHTT SS  TTTHHHHT    SS  :    
ExpBur          :eeeeebebeebbebeebebbbebeebebeebebbbebbeeeeebeeeeee---eeebbebebeebbbbbbbbbbebbeebbeeeeeebbbebbbbbeeeb:    

queryA       418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
                :*************************************************************************************      *********:
6crx_A_1     405:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFEXXXXXXTVCGPKLST: 504
SecStr          : EEEEEE TTTT  SS BTT EEE   SS   TT        BBTTTB   TT TT B SEEE  B SSS GGGSEEEEEEEEE ------ EE      :    
ExpBur          :bbbbbbbbeeebbeeebbeebebbebbeeebeebeebeeeebbbeeeeebeeeeeebeebbeebbbeeeeeebebbbbbbbbbee------ebebeeeee:    

queryA       518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
                :*********************************************************** ****************************************:
6crx_A_1     505:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCAFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 604
SecStr          :   TTS EEEEESS EEEEEEEE      TT  EEE SSS EEEEE TTT  EEEEE   EEEEEEEES TTT    EEEEET  HHHHHHHHHTT EES:    
ExpBur          :ebeeeebbebebeeeeeebbbeeeeeebeeeeeebeeeeeebebbbbeeeeebbebeebbebbbbbbbbbbeebeeebbbbeebebeebeebbeeeebee:    

queryA       618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
                :**********************************************        **********************************************:
6crx_A_1     605:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVXXXXXXXXKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 704
SecStr          :  SS   TT EEE SSEEEESSEEEEEEE  SEEEETTEEEEEE  -------- EEEEEEE  S        SSEEEEEEEE  EEEEEEE      EE:    
ExpBur          :eeeeeebeeeeeeeebbbbbebeeeeeeeeeebebeeeebbbeeee--------eebbbbeeeeeeeeeeeeeeeeeebbeebebebeebbbbbbbebbe:    

queryA       718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
                :********************************************************************************************        :
6crx_A_1     705:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTXXXXXXXX: 804
SecStr          :E SHHHHTSS HHHHHHHGGG S HHHHHHHHHHHHHHHHHHHHHHHTT  S     S  EETTEEGGGTS  SSSTT S HHHHHHHTTT --------:    
ExpBur          :bebeebbbeeeeebeebbeeeeeebeebeeebeebbeebeebbeebbeebeeeeeeeeebeeebbebeebbbeeeeeeeebebbbbbbeebe--------:    

queryA       818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
                :******       ***************************************************************************************:
6crx_A_1     805:QYGECLXXXXXXXLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 904
SecStr          :  B   -------      SSSEEE   SS HHHHHHHHHHHHHHHTTSGGGGGSSS     HHHHHHHHHHHTT  THHHHTTHHHHHHHHHHHHHHHH:    
ExpBur          :eebeee-------eeeeeeebbbebeeeeeeeeebbeebbbbbbbbbebbebbeeeeeeeeebeebbbebbeebebeeebbeeeeeebbeebeebbeebe:    
Contact         :                                                           b                                        

queryA       918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
                :**************************************************  ************************************************:
6crx_A_1     905:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1004
SecStr          :HHHHH   TTHHHHHHHHHHHHHHHHHHHTSS  TTSS SSHHHHHHHS TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS:    
ExpBur          :eebeeeeeebeebeebeeebeebbeebeeeeeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeebbeebbebbeebbbe:    

queryA      1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
                :****************************************************************************************************:
6crx_A_1    1005:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1104
SecStr          :   STBTTBSSEEEEEEEEEETTEEEEEEEEE EEEEEEEEEES EEETTEEEEESSSEEEE SS EEEE SSS   EE  SSSEEEEEESSSSSS EE :    
ExpBur          :ebeeeebbbeeebbbbbbbbbeebbbbbbbbbeeeeeeebeebebbbbeeebbeeeeeebbeeeeeebbbeeebebeeebeeeebeeeeebeeeeeeeeb:    

queryA      1118:TVY:1120
                :***:
6crx_A_1    1105:TVY:1107
SecStr          :   :    
ExpBur          :ebe:

Input Residue Numbers for Focused Sites

ex) 2,15,123