Protein Model on 6crw_C_1_W_1 (TEMPLATE: 6crw )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(SPIKE_SARS) C 1 (C) polymer(polypeptide(L)) [1068 aa] Spike glycoprotein,Fibritin :SPIKE_CVHSA:D9IEJ2_BPT4
2 b W 1 (W) branched(oligosaccharide) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 1080N 1082T 1083S 1085F 1094P (identity: 100.0 %/96.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6crw_C_1 identity=96.6%
queryA        18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
                :****************************************************************************************************:
6crw_C_1       5:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 104
SecStr          :     S  B    EEEEESB   B  SS    S EEEEEEEE  TTEEEEEEEE TTB     EE TTEEEEEEEESS    EEEEESS STTS EEEEE:    
ExpBur          :eeeebeeeeebeeeebebbebbbbbbeeeeeeeeeeebeebbbbbebebbbbbbeeebbbbeebebeebbbbbbbbbbbbbbbbbbbeebeeeebbbbbb:    

queryA       118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
                :****************************************************************************************************:
6crw_C_1     105:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 204
SecStr          :E SS EEEEEEEEEEEEEEEEEEBTTT  EEEEEEEEEEEEEEEEEE        S   SSEEEEEEEEEEEETTEEEEEEEEEEEEESSS    B  BE:    
ExpBur          :bebeebbbebbbbebbeebbbbbbeeebebeebebeeeeeeeeeeeebeeeeeebbeeeeebeebbbbbbbeeeeebbbbeeebebebeeebeeeeebbe:    

queryA       218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
                :***********************   **************************************************************************:
6crw_C_1     205:PIFKLPLGINITNFRAILTAFSPXXXIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 304
SecStr          :EEEEEE     SEEEE     B ---      EEEEEEE EEEEEEEEE TTS EEEEEETTS HHHHHHHHHT SS  SEEEE   EEE    EEE  S:    
ExpBur          :eeeebebebebeebbbbbbbbbe---eebbbbbbbbbbebeebebbbebeeeeebeebbbbebebbbbbebeeeeeebeebeeebeebebeeeeebbbbe:    

queryA       318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
                :*************************************************    ***********************************************:
6crw_C_1     305:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCXXXXATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 404
SecStr          :S  B    TTTTS S    STT EEEEE SB   SHHHHS SSBS  B ---- THHHH  BS EEEEEEEE HHHHTT SSS TTHHHHTT B  SS  :    
ExpBur          :eebeeeebeebbebeebebbbebeeeebeebbbebebbeebeebeeeee----eebeeebbeeebbbbbbbbbbebbeebeeeeeebbbbebbbbbeeeb:    

queryA       418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
                :*************************************************************************************      *********:
6crw_C_1     405:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFEXXXXXXTVCGPKLST: 504
SecStr          :  EEEEE TTTS BSS B S EEE   SS   BT      S B TTS    TTSTT B SEEE  BBSSS GGGS EEEEEEEE ------ B SS    :    
ExpBur          :bbbbbebbeeebbeeebbeeeebbebbeeebeebeebeeeebbbeeeeebeeeeeebeebbeebbbeeeeeebebbbbbbbbbbe------ebbbebeee:    

queryA       518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
                :*********************************************************** ****************************************:
6crw_C_1     505:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCAFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 604
SecStr          :    SSEEEEEETTEEEEEEEEE      TT  EE  SSS   EEE TTT  EEEEE   EE EEEEES TTT S  EEEEET  HHHHHHHHHTT EES:    
ExpBur          :ebeeeebbebebeebeeebbbeeeeeebeeeeeebeeeeeeebbbbbeeeeebbebeebbeebbbbbbbbeeebeebbbbbeebebeebeebbeeebbee:    

queryA       618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
                :**********************************************        **********************************************:
6crw_C_1     605:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVXXXXXXXXKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 704
SecStr          :  SS   TT EEEETTEEEES EEEEEEE  SEEEETTEEEEEE  -------- EEEEEEE  S        SSB  EE SEEEEEEEEEEE     EE:    
ExpBur          :ebeeeebeeeeeeeebbbbbebeebeeeeeeebebeeebbbbbeee--------ebbbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbe:    

queryA       718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
                :********************************************************************************************        :
6crw_C_1     705:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTXXXXXXXX: 804
SecStr          :E SIIIIISS HHHHHHHGGG THHHHHHHHHHHHHHHHHHHHHHHH   SS     S  EETTEE TTTS  TTS SS  HHHHHHTTT  --------:    
ExpBur          :bebeebbbeebeebeebbeeeeeebeebeeebeebbebbeebbeebbeeeeeeeeeeeebebebbebebbbbeeeeeeeebebbeebbebbe--------:    

queryA       818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
                :*******      ***************************************************************************************:
6crw_C_1     805:QYGECLGXXXXXXLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 904
SecStr          :  BEEE ------ EEE  SSSEEE   SS HHHHHHHHHHHHHHHTTTTHHHHHSS     HHHHHHHHHHTTT  THHHHHTHHHHHHHHHHHHHHHH:    
ExpBur          :eebeeee------eeeeeeebbbebeeeebeeeebbeebbbbbbbbbebbeebeeeeeeeeebeebbbebbeebebeeebbeeeeeebbeebbebbeebe:    

queryA       918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
                :**************************************************  ************************************************:
6crw_C_1     905:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1004
SecStr          :HHHHH  SSSHHHHHHHHHHHHHHHHHHHTTS  TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS:    
ExpBur          :eebeeeeeebeebeebeeebeebbeebeeeeeeeeebebbebeebeeeeeeeebeeebeebbebbbebbeebbeebeeebeebeeebeebbebbeebbbb:    

queryA      1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
                :****************************************************************************************************:
6crw_C_1    1005:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1104
SecStr          :   SSSTTSSSEEEEEEEEE SSEEEEEEEEEEE  EE  EEESEEEETTEEEEESSSEEEE SS EEEE SSS   B   TTSEEEEEESSSSSSEE  :    
ExpBur          :ebeeeebbbeeebbbbbbbbbeebbbbbbbbbeeeeeeebebeebbbbeeebbeeeeeebbeeeeeebbbeeebeeeeebeeebbeeeeebeeeeeebee:    
Contact         :                                                              b bb b        b                       

queryA      1118:TVY:1120
                :***:
6crw_C_1    1105:TVY:1107
SecStr          :   :    
ExpBur          :ebe:

Input Residue Numbers for Focused Sites

ex) 2,15,123