Protein Model on 6ack_B_1_C_1
(TEMPLATE: 
6ack
)Protein Model on 6ack_B_1_C_1
(TEMPLATE: 6ack
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | B 1 (B) | polymer(polypeptide(L)) [1065 aa] | Spike glycoprotein :SPIKE_CVHSA | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [1057 aa] | Spike glycoprotein :SPIKE_CVHSA | 42Y 45E 46I 47F 48R 49S 50D 269N 271T 401Q 719D 721N 737Q 738Y 739G 741F 744Q 747R 758R 768K 769Q 770M 771Y 772K 774P 832I 833C 834A 835Q 836K 837F 838N 843L 844P 846L 848T 851M 855Y 865T 866A 868W 869T 871G 872A 876L 877Q 878I 879P 882M 886Y 889N 894T 895Q 896N 899Y 960N 984Q 987Q 1009T 1012S 1013E 1021R (identity: 100.0 %/96.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6ack_B_1 identity=96.6% |
queryA 18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
:****************************************************************************************************:
6ack_B_1 18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
SecStr : S EEE TT SSS SS EEEEEEE TT EEEEE BTTB EE SSEEEEE SS S EEEESSSSTT EEEEEE:
ExpBur :eeeebeeeeeeeeeeeebbebbbbebeeeeeeeebeebebebbbbebebebbebeeebbbbeebebeebbbbbbbbbbbbbbbbbbbeebeeebebbbbb:
Contact : b bbbbbb
queryA 118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
:****************************************************************************************************:
6ack_B_1 118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
SecStr :E SSSEEEEEEE S EE SSS TT TT S EEEEEEEE S S SS EEEEEEEETTEEEEEEE SSS S E:
ExpBur :beeebbbbbbbbbebbebbbbebeeeebebeeebbeeeeeeeeeeeebeeeebebbeeeeebeebbbbbbbbeeeebbbbebeeeeeeeeebeebebbbe:
queryA 218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
:********************** **************************************************************************:
6ack_B_1 218:PIFKLPLGINITNFRAILTAFSXXXXIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
SecStr :EEE S EEEE EE ---- S EEEEE EEEEEEEEE SSS EEEEEESTT HHHHHHHHHT SS SEEEEEEE B EE :
ExpBur :eebebebeeebebbbbbbbbbe----ebbbbebbbbbbebeebebbbebbeebebeebbbbebebbbebebeeeeeebeebeeebeebebeeebebbbbe:
Contact : b b
queryA 318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
:****************************************************************************************************:
6ack_B_1 318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
SecStr : SHHHHTT S STT EEEEE S B TTTSS S S EESSS STTGGGS BS EEEEEEEE TTTTTT SSS TTHHHHT SS :
ExpBur :eeeeebebeebbebeebbbbbebeebebeebebebeebeeeeebeeeebeeeeeeebbeebbbbbbbbbbbbebebbeebbeeeeeebbbebbbbbeeeb:
Contact : b
queryA 418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
:****************************************************************************************************:
6ack_B_1 418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
SecStr : EEEEEE TTTTS TT S EE SS SS BTTB TTSTT EE TT GGG EEEEEEEE SSS BB S :
ExpBur :bbbbbbbbeeebbeeebbeeeebbeeeeeebeeeeeeeeeeebbeeeeebebeeeebeebeeebebeeebeeeebbbbbbbbbbeebeeebbbbbeeeee:
queryA 518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
:****************************************************************************************************:
6ack_B_1 518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
SecStr : SSSEEEEE SS EEEEEEEE TT SSSS EEETTTEEEEEE SB EEEEEE SSS EEE SB SSHHHHHHHTT BSS:
ExpBur :eeeeeebbebbbbebeeebbbeebeeebeeeebeeeeeeeebebbebbeeeebebeeebbebbbbbbbbbeeeeeebbbbbeebebeebeebbeeeebeb:
queryA 618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
:******************************************* ********************************************:
6ack_B_1 618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYXXXXXXXXXXXXXIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
SecStr : SS B SSS EET S SEEETTTEEEB ------------- B SS SS B EE EEEEE EE:
ExpBur :ebeeeeeebebeeeeebbbbebeeeeeeeeeebebeeebbbbe-------------bebbeeeeeeeeeeeeeeeeeebebeeebebeeebbbbbbbbbe:
queryA 718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
:********************************************************************************************** :
6ack_B_1 718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLAXXXXXX: 817
SecStr :E TTTSSS S SSHHHHHHTT SHHHHHHHHHHHHHHHHHHHHHHHHTT S S SSS TTTS TTSSSSS HHHHHHHHT ------:
ExpBur :bebeebbbeeeeebbebbeeeeeebeebeeebeebbeebeebbeebbbebeeeeeeeeebeeebbebeebbbeeeeeeeebebbbbbeeeeeee------:
Contact : b b bbb b b b b bbbbb b
queryA 818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
: **************************************************************************************:
6ack_B_1 818:XXXXXXXXXXXXXXICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
SecStr :-------------- TTSEEE SS HHHHHHHHHHHHHHHHSS S SSSSS SHHHHHHHHHTTT THHHHTSHHHHHHHHHHHHHHHH:
ExpBur :--------------eeeeeeebbeeeeeeeeeeebbebbbbbbbbbbebbeebeeeeeeeeebeebbbebbeebebeeeebeeebeebbeebbebbeebe:
Contact : bbbbbbb bb b b b b bb bb bb bbbb b b b bbb b
queryA 918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
:****************************************************************************************************:
6ack_B_1 918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
SecStr :HHHHT STTHHHHHHHHHHHHHHHHHHHHHHS SSS SSHHHHHHT SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS:
ExpBur :eebeeeeeebeebeebbeebbeeeeebeeebeeeeebebbebeebbeeeeeeebeeebbebbebbbebbeebbeebeeebeebeebbeebbebbeebbbb:
Contact : b b b b bb
queryA 1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
:****************************************************************************************************:
6ack_B_1 1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
SecStr : STTSSSSS EEEEEE SSSEEEEEE EE BB SS SSS SSS BSTT SSS SSSS S TTS S :
ExpBur :bbeeeeebbebebbbbbbbbbeebbbbbbbbbeeeeeeeeebbebbbeeeebbebeeeebbbbbeeeebbeebeebeeebeeebbeebeebeeeebebee:
Contact : b
queryA 1118:TV:1119
:**:
6ack_B_1 1118:TV:1119
SecStr : :
ExpBur :be:
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[assembly_id:1]
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