Protein Model on 6acc_B_1_C_1
(TEMPLATE: 
6acc
)Protein Model on 6acc_B_1_C_1
(TEMPLATE: 6acc
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | B 1 (B) | polymer(polypeptide(L)) [1065 aa] | Spike glycoprotein :SPIKE_CVHSA | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [1065 aa] | Spike glycoprotein :SPIKE_CVHSA | 42Y 45E 46I 47F 48R 49S 50D 51T 85D 110K 112Q 160T 189N 191D 192G 193F 217K 218P 221K 223P 225G 227N 269N 401Q 719D 721N 722M 727D 737Q 738Y 739G 740S 741F 744Q 761R 768K 769Q 770M 771Y 772K 779F 832I 833C 834A 835Q 836K 837F 838N 839G 843L 844P 845P 846L 848T 851M 855Y 864A 865T 868W 869T 872A 876L 877Q 878I 879P 880F 882M 886Y 889N 893V 894T 895Q 896N 899Y 900E 945V 948L 949S 960N 963L 964S 965R 966L 967D 984Q 987Q 991T 994L 1001R 1009T 1012S 1013E 1016L 1021R (identity: 100.0 %/96.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6acc_B_1 identity=96.6% |
queryA 18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
:****************************************************************************************************:
6acc_B_1 18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
SecStr : S EEEE TT B SSS S EEEEEEEE TT EEEEEEE SS EE S EEEEEEESS EEEESSSSTTSEEEEEE:
ExpBur :eebeeeeeeeeeeeebebbebbbbbbeeeeeeeeeeebebbbbbbebebebbebeeebbbbeebebeebbbbbbbbbbbbbbbbbbbeebeeebebbbbb:
Contact : b bbbbbbb b b b
queryA 118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
:****************************************************************************************************:
6acc_B_1 118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
SecStr :E SSSEEEEEEE S EEE SSS TT S EEEE S SS EEEEEEEEEETTEEEEEE B SSS BE:
ExpBur :beeebbbbebbbbebbebbbbebeeeebebeeebbeeeeeeeeeeeebeeeebebeeeeeebeebbbbbbbeeeeebbbbebeeebeeeeebeeeebbbe:
Contact : b b bbb b
queryA 218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
:********************** **************************************************************************:
6acc_B_1 218:PIFKLPLGINITNFRAILTAFSXXXXIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
SecStr :EEEEE EEEE EEE ---- SEEEEEEE EEEEEEEEE SSS EEEEEESSS HHHHHHHHHT SS SEEEE BB EE :
ExpBur :eebebebeeebeebbbbbbbbe----ebbbbebbbbbbebeebebbbebbeeeebeebbbbeeebbbbbebeeeeeebeebeeebeebebeeebebbbbe:
Contact :b b b b b b
queryA 318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
:****************************************************************************************************:
6acc_B_1 318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
SecStr :S B THHHHSS S STT EEEEE S B TTTS S SEEEESSS STTGGG BSSEEEEEEEE SSGGGG SSS TTTTTTS SSS :
ExpBur :eeeeebebeebbeeeebebbeebeeeebeebebebeebeeeeebeeeebeeeeeeebeeebbbbbebbbbbbebebbeebeeeeeeebbbebbebbeeeb:
Contact : b
queryA 418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
:****************************************************************************************************:
6acc_B_1 418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
SecStr : EEEEEE TTTT TT EEE SS TT TTS TTSTT SEEE SSS GGGS EEEEEEE SSS BB S :
ExpBur :bbbbbbbbeeebbeeeebeeeebbeebeeebeeeeeeeeeeebbeeeeebeeeeeebeebeeebebeeeeeeeebbbbbbbbbbeebeeebbbbbeeeee:
queryA 518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
:****************************************************************************************************:
6acc_B_1 518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
SecStr : TTSEEEEE SS EEEEEEEE TT B TTS BB BTTTB EEEE SB EEEE SSS EEE S SSHHHHHHHTT BSS:
ExpBur :eeeeeebbebbbbeeeeebbbbeeeeebeeeeeebeeeeeeeebbebeeeeebebeeebbeebbbbbbbbeeeeeebbbbbeebebeebeebbeeeebeb:
queryA 618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
:******************************************* ********************************************:
6acc_B_1 618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYXXXXXXXXXXXXXIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
SecStr : SS S EE SSS EES B SS SEE SSS EE ------------- BEE S SS B EEEEEEEEE EE:
ExpBur :ebeeeebeeebeeeeebbbbbbeeeeeeeeeebebeeebbbbe-------------bbbbeeeeeeeeeeeeeeeeeebbbebebebeeebbbbbbbbbe:
queryA 718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
:********************************************************************************************** :
6acc_B_1 718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLAXXXXXX: 817
SecStr :E TTTSSS S SSHHHHHHTT SHHHHHHHHHHHHHHHHHHHHHHHT SS S STT TTTS TTSSSSS HHHHHHHHH ------:
ExpBur :bebeebbbeeeeebeebbeeeeeebeebeeebeebbeebeebbeebbeebeeeeebeeebeeebbebeebbbeeeeeeebbebbebbeeebeee------:
Contact : b bb b bbbbb b b bbbbb b
queryA 818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
: **************************************************************************************:
6acc_B_1 818:XXXXXXXXXXXXXXICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
SecStr :-------------- TTSEEE SS HHHHHHHHHHHHHHHHSS S SSSS SHHHHHHGGGSSS THHHHHSHHHHHHHHHHHHHHHH:
ExpBur :--------------eeeeeeebbeeeeeebeeeebbebbbbbbbbbbebbeebeeeebeeeebeebbbebbeebebeeebbeeeeeebbeebbebbeebb:
Contact : bbbbbbbb bbbb b b b bb bb b bbbbb b b b bbbb bb
queryA 918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
:****************************************************************************************************:
6acc_B_1 918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
SecStr :HHHHS STTHHHHHHHHHHHHHHHHHHHHHHS SSSSSSSTTTHHHH STHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS:
ExpBur :eebeeeeeebeebeebbeebbeeeeebeeebeeeeebeeeebeebeeeeeeeebeebbeebbebbbebbeebbeebeeebeebeebbeebbebbeebbbb:
Contact : b bb b bbbbb b b b b b b bb b
queryA 1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
:****************************************************************************************************:
6acc_B_1 1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINN:1117
SecStr : STTTSSSSS EEEEEEETTEEEEEEEEEE B B SSEESSSSEEE SS EETTTT EE SSS EE STT EEES TTS SS :
ExpBur :bbeeeebbbebebbbbbbbbbeebbbbbbbbbeeeeeeeeebbebbbeeeebbebeeeebbbbbeeeebbeebbebeeebeeebbeeeeeeeeeebebee:
Contact : b
queryA 1118:TV:1119
:**:
6acc_B_1 1118:TV:1119
SecStr : :
ExpBur :be:
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[assembly_id:1]
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