Protein Model on 5x5b_B_1 (TEMPLATE: 5x5b )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description
1 a A(SPIKE_SARS) B 1 (B) polymer(polypeptide(L)) [1053 aa] Spike glycoprotein
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5x5b_B_1 identity=96.7%
queryA        18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
                :*********************************************************** ****************************************:
5x5b_B_1       5:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFDNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 104
SecStr          :     S       EEEE SS  EE  SS    S EEEEEEEE  TT EEEEE  BTTB     EE  S EEE    SS    EEEEESSSSSSSEEEEE :    
ExpBur          :eeeebeeeeeeeeeebebbebbbbbbeeeeeeeebeebeebbbbbebebbbbbbeeebbbbeebebeebbbbbbbbbbbbbbbbbbbbebeeebebbbbb:    

queryA       118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
                :****************************************************************************************************:
5x5b_B_1     105:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 204
SecStr          :  SSEEEEEEEEE   SS    B SSS  B   TT S EEEEEEEEEEEE     S   SSEEEEEEEEEE  SS  EEEEEEEEEEESSS      EEE:    
ExpBur          :bebeebbbbbbbbebbebbbbebeeeebeeeeeebeeeeeeeeeeeebeeeebebeeeeeebeebebbbbbeeeeebbbbebeeebebeeebeeeebbbe:    

queryA       218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
                :**********************     *************************************************************************:
5x5b_B_1     205:PIFKLPLGINITNFRAILTAFSXXXXTWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 304
SecStr          :EEEE        EEEEE   B ----     S  EEEEE EEEEEEEEE SSS EEEEEETTT HHHHHHHHHT SS  SEE          B     S :    
ExpBur          :eeeebebebebeebbbbbbbbe----ebbbbebbbbbbebeebebbbebeeebebeebbbbbbebbbbbbbeeeebebeebeeebeebbeeeeebebbeb:    

queryA       318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
                :****************************************************************************************************:
5x5b_B_1     305:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 404
SecStr          :SS EE STHHHHS S    STT EEEE  SEE  HHHHHHS   SB    SS HHHHTT   S  EEEEEEEEGGGSTTSSSS TTSSTTTSS   SSS :    
ExpBur          :eeeeeebbeebbeeeebebbbebeeeebeebbbebeebeeeeebeeeeeeebebeebeebbbbbbbbbbbbbebebbebbbbbeeeeebbebbbbbeeee:    

queryA       418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
                :****************************************************************************************************:
5x5b_B_1     405:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 504
SecStr          :  EEEEE TTTT  TT  TTS  B   SS   TT        B SS  B  TTSTT   SB      TTS GGGSEEEEEEEE   S SS  S  S    :    
ExpBur          :bbbbbbebeeebbeeebeeebebbeeeeeebeeeeeeeeeebbbeeeeebeeeeeebeebbeeebbeeebeeeebbbbbbbbbbeeeeeebbbbbeeeee:    

queryA       518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
                :****************************************************************************************************:
5x5b_B_1     505:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 604
SecStr          :   SSS B   TTS     B  B      TT  EE  TTS   EEE TTT  EEE B        EEE  TTT     EE  SS HHHHHTTTTTT SSS:    
ExpBur          :eeeeebbbebbbbeeeeebebeeeeeebeeeebbbeeeeeeebbbbbbeeeeebebeebbeeebbbbbbbbeebeeebbbbbeeebeebeebeeeebbeb:    

queryA       618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
                :*********************************************         **********************************************:
5x5b_B_1     605:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXXKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 704
SecStr          :  SS    SS    SSS   SSB  S     SEE SSSEEEES  ---------   EEEE   S        SS  EEE  B   EEEEEEE    EEE:    
ExpBur          :ebeebeeeeeeeebeebbbbbbeeeeeeeeeebebeeebbbbeee---------eebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbbbbb:    

queryA       718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
                :********************************************************************************************        :
5x5b_B_1     705:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTXXXXXXXX: 804
SecStr          :E HHHHHHSS HHHHHHHHTS STTTHHHHHHHHHHHHTTHHHHHHHTTSSS     S   SSS   TTS  TTT SSSS HHHHHHTTS  --------:    
ExpBur          :bebeebbbeebebbeebbeeeeeeeeebeebbeebbebbbebbeebbeebeeeeebeeeeebebbebebbbeeeeeeeebbebbebbbeeee--------:    

queryA       818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
                :             ***************************************************************************************:
5x5b_B_1     805:XXXXXXXXXXXXXLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 904
SecStr          :-------------      TT EEEE  SS HHHHHHHHHHHHHHHHHT SHHHHSS     HHHHHHHHHHHHTS HHHHHHSHHHHHHHHHHHHHHHH:    
ExpBur          :-------------eeeeeeebbbeeeeeebeeeebbeebbbbbbbbbebbeebeeeeeeeeebeebbbebbeebebeeebbeeebeebbeebbebbeebe:    

queryA       918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
                :****************************************************************************************************:
5x5b_B_1     905:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1004
SecStr          :HTTTSS SSSHHHHHHHHHHHHHHHHHHHTTS  SSSS S HHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS:    
ExpBur          :eebeeeeebeeebbebeeebeebeeebeeebeeeeebeebebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeebbeebbebbeebbbb:    

queryA      1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFV:1104
                :***************************************************************************************:
5x5b_B_1    1005:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFV:1091
SecStr          :   STTTSSSSSEEEEEEEEETTEEEEEEEE  B  EEE EE SS   SSS  EESS   EEETTEEEEEETTEEEEEE  TTTEE :    
ExpBur          :bbeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeeeebebeeebeeeeeeeeeeebbbbeeeeeebbbbebbebeeeeeeebbee:

Input Residue Numbers for Focused Sites

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