Protein Model on 5x58_A_1_B_1 (TEMPLATE: 5x58 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(SPIKE_SARS) A 1 (A) polymer(polypeptide(L)) [1054 aa] Spike glycoprotein
2 b B 1 (B) polymer(polypeptide(L)) [1053 aa] Spike glycoprotein 301Q 303S 341E 342R 368G 369V 370S 372T 373K 377L 383Y 416F 444R 450P 451F 452E 453R 454D 455I 456S 458V 502E 503L 504L 505N 531G 533T 534G 535T 543K 544R 545F 546Q 548F 549Q 550Q 551F 552G 553R 554D 556S 557D 558F 559T 573I 574S 575P 577S 578F 579G 600D 601V 602N 632Q 633A 651P 652I 653G 654A 655G 656I 657C 678T 679M 681L 682G 683A 684D 685S 686S 687I 688A 689Y 690S 691N 693T 694I 695A 697P 939Q 943T 947Q 950S 951N 952F 953G 977R 984Q 985S 988T 991T 992Q 995I 999E 1021R 1022V 1023D 1027K 1028G 1029Y 1051P 1056N 1061P 1071F 1072P 1074E 1076V 1089R 1103F 1104V (identity: 100.0 %/96.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5x58_A_1 identity=96.8%
queryA        18:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 117
                :*********************************************************** ****************************************:
5x58_A_1       5:RCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFDNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIII: 104
SecStr          :     S  B     EEE  EEEEE  SS    S EEEEEEEE  TT EEEEEEE SSB     EE TT EEEEEEESS     EEEESSSSSSS EEEEE:    
ExpBur          :eeeebeeeeeeeeeebebbebbbbebeeeebeeeeeebebbbbbbebebbbbebeeebbbbeebebeebbbbbbbbbbbbbbbbbbbbebeeebebbbbb:    

queryA       118:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 217
                :****************************************************************************************************:
5x58_A_1     105:NNSTNVVIRACNFELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLK: 204
SecStr          :E SSEEEEEEEEE   S  BEEE TTT  EEEE S S EEEEEEEEEEEE     S   SS  EEEEEEEEEETTEEEEEEEE     SSS    EEEEE:    
ExpBur          :beeebbebbbbbbebbebbbbebeeeebeeeeeebeeeeeeeebeeebeeeebebeeeeeebeebbbbbbbeeeeebebbebeeebebeeebbeebbbbe:    

queryA       218:PIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 317
                :**********************     *************************************************************************:
5x58_A_1     205:PIFKLPLGINITNFRAILTAFSXXXXTWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFP: 304
SecStr          :EEEEEE      EEEE B  B ----     SEEEEEEE EEEEEEEE  SSS   EEEETTSSHHHHHHHHHT SS  SEE  B       EEE     :    
ExpBur          :eeeebebebebeebbbbbbbbe----ebbbbebbbbbbebeebebbbebeeebebeebbbbbbebbbbbbbeeeebebeebeeebeebbebeeebebbeb:    
Contact         :                                                                                   b b              

queryA       318:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 417
                :****************************************************************************************************:
5x58_A_1     305:NITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFM: 404
SecStr          :SS EE GGGTTTT S    STT EEEEE SEE   STTTSS   SEEEESSS SSTTTTS BS EEEEEEEE HHHHHHSSBS TTSSSTTTS B SSS :    
ExpBur          :eeeeeebbeebbeeeebebbbebeeeebeebbbebeebeeeeebeeeeebeeebeebeeebbbebebbbbbbbeebbebbbeeeeeeebbebbebbeeee:    
Contact         :                       bb                         bbb bb   b     b                                b 

queryA       418:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 517
                :****************************************************************************************************:
5x58_A_1     405:GCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLST: 504
SecStr          : EEEEEE TTTT  SS   S   B   SS   TT        B SSS    TTSTT B SB      TTS GGGS EEEEEEE   S SS  B       :    
ExpBur          :bbbbbbebeeebbeeebbeebebbeeeeeebeeeeeeeeeeebbeeeeebeeeeeebeebbeebebebeeeeeebbbbbbbbbbeeeeeebbbbbeeeee:    
Contact         :                          b     bbbbbbb b                                           bbbb            

queryA       518:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 617
                :****************************************************************************************************:
5x58_A_1     505:DLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTP: 604
SecStr          :     SSEEE  SS    BEEEE      TT  EEESSSSSEEEEE TTT  EEEEE      B EEE  TTT     EEEE S SHHHHHHHTTT  SS:    
ExpBur          :eeeeebbbebbbbebeeebbbeebeeebeeeebbbeeeeeebebbbbbeeeeebebeebbeeebbbbbbbbeebeeebbbbbebebeebeebeeeebbeb:    
Contact         :             b bbb       bbbb bbbbbbb bbbb             bbb bbb                    bbb               

queryA       618:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 717
                :*********************************************         **********************************************:
5x58_A_1     605:AWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXXKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTS: 704
SecStr          :  SS    S     TT EESS EE S     SEEEETTEEEE   ---------   EEEE   S        SSEEEEES B   EEEEEEE    B  :    
ExpBur          :ebeebeeeeeebeeeebbbbebeebeeeeeeebebeeebbbbeee---------eebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbbbbb:    
Contact         :              bb                 bbbbbbb                    bb bbbbbbbbbbb bbb b                    

queryA       718:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMK: 817
                :********************************************************************************************        :
5x58_A_1     705:VDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTXXXXXXXX: 804
SecStr          :  HHHHHHSS SHHHHHHGGG SSSSSHHHHHHHHHHHHHHHHHHHHTT SS     S   BTTB    S  SSS SSSS HHHHHHHHS  --------:    
ExpBur          :bebeebbbeebeebeebbeeeeeebeebeebbeebbebbbebbeebbeebeeeeeebeebebebbebebbbeeeebeeebbebbebbbeebe--------:    

queryA       818:QYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 917
                :            ****************************************************************************************:
5x58_A_1     805:XXXXXXXXXXXXDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQ: 904
SecStr          :------------       TT    B  SS HHHHHHHHHHHHHHHHHT SHHHHSS     HHHHHHHHHHHHT  THHHHHSHHHHHHHHHHHHHHHH:    
ExpBur          :------------eeeeeeeeebbeeeeeebeeeebbeebbbbbbbbbebbeebeeeeeeeeebbebbbebbeebebeeebbeeeeeebbebbbebbeebe:    

queryA       918:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1017
                :****************************************************************************************************:
5x58_A_1     905:ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG:1004
SecStr          :HHHHHS SHHHHHHHHHHHHHHHHHHHHHTSS  TTSS S HHHHHTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS:    
ExpBur          :eebeeeeebeeebbebeeebeebbeebeeebeeeeebeeeebeebeeebeeeebeebbeebbebbbebbeebbeebeebbeebeebbeebbebbeebbbe:    
Contact         :                     b   b   b  bbbb                       b      bb  b  bb  b   b                  

queryA      1018:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFV:1104
                :***************************************************************************************:
5x58_A_1    1005:QSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFV:1091
SecStr          :   STTTS SSSEEE  EEEETTEEEEEEEE  B  EEEEEE SSB  SSS BEESS   EEETTEEEB  TTS   B   STTEE :    
ExpBur          :bbeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeeeebebeebeeeeeebeeeeebbbbeeeeeebbbbebbebeeeeeeeebee:    
Contact         :   bbb   bbb                     b    b    b         bb b b            b             bb

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