#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [1120 aa] | Spike glycoprotein :SPIKE_SARS2 |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7jjj_A_1 identity=98.7% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 :****************************************************************************************************: 7jjj_A_1 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 SecStr : EEEE TT EE SS S EEEEEEEE TT EEEEEEEE STT EE EEE TT EEEEEEESSS EEEEEEESS STT: ExpBur :eebebeeeeeeeeeebebbbbbbbbeeeeeeeeeeeebebebbbbebebbbbbbeeeeeeeeeebbbbeebebeebbbbbbbbbbbbbbbbbbbeebeee: queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 :****************************************************************************************************: 7jjj_A_1 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 SecStr :S EEEEEE SS EEEEEEEEEE SS EEEEE SSSS EEE TTEEEEEEEEEEEE SS EEEEEEEEEETTEEEEEEEEEE S: ExpBur :eebbbbbeebeeeebebbebebbebbbbbbebeeeeeeeeeebeebbeeeeeeeeeeebeeeebebeeeeeebeebebbbbbeeeeebebbbeeeebebe: queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 :****************************************************************************************************: 7jjj_A_1 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 SecStr :SS EEEEEEEE EEEEEEEEEE TTS S HHHH EE SEEEEEEE EEEEEEEEE TTS EEEEEETTS HHHHHHHHTT S SEEE: ExpBur :eebeeeebbbeeeeebebebebeebbbbbbbbeeeebeeeeeebbbbbebbbbbbebeebebbbebeeebebeebbbbeeebbbbbebeeeebebeebee: queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 :****************************************************************************************************: 7jjj_A_1 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 SecStr :EE B EEEE B HHHHHS S BGGG EEEE SEE GGGGTTT SEEEESSS GGGGGG EEEEEEEEEEEEEGGGGGGSSTT: ExpBur :ebeebeeeeeeebbbbeebeeebebeebbeeeebbbbbebeeeebeebbbebeebeeeeeeeeeebeebeeeebeebbbbebbbbbbbbebebbebbeee: queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 :****************************************************************************************************: 7jjj_A_1 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 SecStr : SHHHHHT TT SEEEEE TTTS TT TT EEE SS TT EE TT SS BTTEE SEEE TTS GGGSEEEEEEE: ExpBur :eeeebbeebbebbeebebbbbbbebbeebbeeebbeebebbeebeeebeeeeeeeeeebeebeeeebeeeeeebbeebbeebbbeeeeeebebbbbbbbb: queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 :****************************************************************************************************: 7jjj_A_1 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 SecStr :EEE SSS SEE S SSEEEEEETTEEEEEEEEE TT B TTS EEE SSS EEEEE S BS EEEEE TTT EEEET: ExpBur :bbeeeeeebebbbeeeeeeeeeeebbebbbbbbeeebebeeeeeebeeeebbeeeeeeeeebbbbbeeeebbebeebeeebbbbbbbbeeebeeebbbbe: queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713 :*************************************************************** ************************: 7jjj_A_1 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXXQSIIAYTMSLGAENSVAYSNNSIA: 713 SecStr :T SSS SSS S EEEETTEEEESSEEEEEEE S BTTEEEEEE ------------- EEEEEEE S TTEEE: ExpBur :ebebeeeeeeeeeeeeeeeeebeeeeeeebebeebbbbebeebeeeeeeebebeeebbbbeee-------------eebbbbeeeeeeeeeeeeeeeeee: queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 :****************************************************************************************************: 7jjj_A_1 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 SecStr :EEEEEEEEEEEEEEE EEEE HHHHHHTT HHHHHHHGGGTHHHHHHHHHHHHHHHHHHHHHHHHH SS S STT TTTSB TTSSS: ExpBur :bbeebebebeeebbbbbbbbbebebeebbbeebeebeeebeeeeeebeebeeebeebbeebbebbeebbbebeeeeeebeeeebeebebeebbbeeeeeb: queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 :****************************************************************************************************: 7jjj_A_1 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 SecStr : BHHHHHHHHHS S SS GGGG SGGGGT HHHHHHTTTEEEE SS HHHHHHHHHHHHHHHHHTGGGGSSSS HHHHHHHHHHHHT T: ExpBur :ebbebbbbbbeebeeeeeeeeeeeeebeeeeeeeeeebbbeeebbeeeeeebeeeebbeebbbbbbbbbebbeebeeeeeeeeebbebbbebbeebebee: queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013 :************************************************************************ **************************: 7jjj_A_1 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1013 SecStr :HHHHHTHHHHHHHHHHHHHHHHHHHHH GGGHHHHHHHHHHHHHHHHHHHGGG TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbeeeeeebbebbeebbeebeeebeeeeeebeebeebbeebeebbeebeeebeeeeebebbebeebeeeeeeeebeebbeebbebbbebbeebbeebee: queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 :****************************************************************************************************: 7jjj_A_1 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 SecStr :HHHHHHHHHHHHHHHHHHHTSS TTSSSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEES EESSSSEEEESSSEEEE SS EEEE SSS B: ExpBur :ebeebeeebeebbebbeebbeebbeeeeebbeeebbbbbbbbbbebbbbbbbbbeebeeeebebbebbbeeeebbeeeeebbbbeeeebbbbbeebeeee: queryA 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146 :*********************************: 7jjj_A_1 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD:1146 SecStr : BTTSEEEES TTTSTT EE B TTHHHH : ExpBur :ebbeeebeeeeebeebeebeeeebeeeeeeeee: |