CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(IMA1_HUMAN) | A 1 (C) | polymer(polypeptide(L)) [423 aa] | Importin subunit alpha-1 :IMA1_MOUSE | |
2 | b | B 1 (A) | polymer(polypeptide(L)) [8 aa] | Nucleoprotein | 105S 138F 142W 146N 148A 149S 150G 152S 155T 181Q 184W 187G 188N 191G 192D 228N 231W 235N 238R 270D 273W 277Y (identity: 100.0 %/94.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5v5o_A_1 identity=94.3% |
queryA 75:NWSVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASP: 174 :**** ******** * * ************************************* ********************************************: 5v5o_A_1 74:NWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASP: 173 SecStr : HHHHHHHHTT HHHHHHHHHHHHHHTT SS HHHHHHTT HHHHHHHHT TT HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHTT S: ExpBur :eeeeeebeebbeeeeeeebbebbebbbebbeeeeeebbeebeeeebbeebbebbeeeebbebbbbbbebbbbbbeeeeebbeebbeeebbebbbebbebe: Contact : b b b b bbb b b queryA 175:HAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWA: 274 :******************** ******* ** *********** * ************************* **************** ******* ***: 5v5o_A_1 174:HAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWA: 273 SecStr :SHHHHHHHHHHHHHHHTT HHHHHHHHHTT HHHHHHTT SS GGGS HHHHHHHHHHHHHTT SS HHHHHHHHHHHHHHHT S HHHHHHHHHH: ExpBur :eeebbebbbebbbbbbeebbebbeebbeeebbeebbeebeeeebeeeeeebbebbbebbbbbbeeeeeebeeebbeebbebbbebbebebeebbbebbeb: Contact : b b bb bb b b b b b b queryA 275:ISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVV: 374 :************ **** ************ ************************ ********************************************: 5v5o_A_1 274:ISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVV: 373 SecStr :HHHHHSS HHHHHHHHHTT HHHHHHHHT S HHHHHHHHHHHHHHTTS HHHHHHHHHTTGGGTHHHHTT SSHHHHHHHHHHHHHHTTS HHHHHHHH: ExpBur :bbbbbeeeeebbebbbeeebbebbbebbeeeeeebbebbbebbbbbbebeeebbbebbeeebbebbeebbebeeeebbbbbbebbbebbebeeebbeebb: Contact : b queryA 375:NHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIE: 474 :********* ************* ** **************************** ******* ************************************: 5v5o_A_1 374:NHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIE: 473 SecStr :HTT HHHHHHHHHSS HHHHHHHHHHHHHHHHHS HHHHHHHHHTT HHHHHHGGG S HHHHHHHHHHHHHHHHHHHHHT HHHHHHHHHHTT HHHHH: ExpBur :eeebbeebbebbeeeeeebbeebbebbbbbbeebeeebbeebbeeebbebbbebbebeeeebbbbbbebbbbbbebbeeeeeeeebbeebeeeebbeebe: queryA 475:ALQNHENESVYKASLSLIEKYFS: 497 :*** *********** *******: 5v5o_A_1 474:ALQRHENESVYKASLNLIEKYFS: 496 SecStr :HHHT SSHHHHHHHHHHHHHHT : ExpBur :ebbeeeeeebeebbeebbeebee: |