Protein Model on 8q8k_A_1_C_1 (TEMPLATE: 8q8k )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(IMA1_HUMAN) A 1 (A) polymer(polypeptide(L)) [423 aa] Importin subunit alpha-1 :IMA1_MOUSE
2 b C 1 (C) polymer(polypeptide(L)) [12 aa] Large T antigen :LT_POVK6 142W 146N 148A 149S 150G 151T 152S 155T 184W 188N 191G 192D 231W 235N 238R 270D 273W 277Y 321V 322T 323G 325D 328T 357W 360S 361N 364A 396E 399W (identity: 100.0 %/94.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8q8k_A_1 identity=94.3%
queryA        75:NWSVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASP: 174
                :**** ******** * * ************************************* ********************************************:
8q8k_A_1      56:NWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASP: 155
SecStr          :   HHHHHHHHHSS HHHHHHHHHHHHHHHT SS   HHHHHHTT HHHHHHHTT TT HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHTT S:    
ExpBur          :eeeeeebeebbeeeeeeebeebbebbeeebebeeeebbeebeeeebbeebeebbeeeebbebbebbbebbbebbeeeeebbebbbeeebbebbbebbebe:    
Contact         :                                                                   b   b bbbbb  b                   

queryA       175:HAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWA: 274
                :******************** ******* ** *********** * ************************* **************** ******* ***:
8q8k_A_1     156:HAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWA: 255
SecStr          :SHHHHHHHHHHHHHHHTS HHHHHHHHHTT HHHHHHTT SS GGGS TTHHHHHHHHHHHTT   SS   HHHHHHHHHHHHHHHT S HHHHHHHHHH:    
ExpBur          :eeebbebbbebbbbbbeeebebbeebbeeebbeebbeebeeeebeeeeeebbeebbebbbbbbeeeeeebeeebbeebbebbeebbebebeebbbebbeb:    
Contact         :         b   b  bb                                      b   b  b                               b  b 

queryA       275:ISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVV: 374
                :************ **** ************ ************************ ********************************************:
8q8k_A_1     256:ISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVV: 355
SecStr          :HHHHHSS HHHHHHHHHHT HHHHHHHHT S HHHHHHHHHHHHHHHTS HHHHHHHHHTTGGGTHHHHTT SSHHHHHHHHHHHHHHHTS HHHHHHHH:    
ExpBur          :bbbbbeeeeebbebbbeeebbebbbebbebeeeebbbbbbebbbbbbebeeebbbebbeeebbeebeebbebeeeebbebbbebbbebbebeeebbeebb:    
Contact         :  b                                           bbb b  b                            b  bb  b          

queryA       375:NHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIE: 474
                :********* ************* ** **************************** ******* ************************************:
8q8k_A_1     356:NHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIE: 455
SecStr          :HTT HHHHHHHHHHS HHHHHHHHHHHHHHHHSS HHHHHHHHHHT HHHHHHTTS S HHHHHHHHHHHHHHHHHHHHTT HHHHHHHHHHTTHHHHHH:    
ExpBur          :eeebbeebbebbeebeeebeebbbebbbebbeebeeebbeebbeeebbebbbebbebebbebbebbbebbeebbebbeeeeeeeebbeebeeeebeeebe:    
Contact         :                     b  b                                                                           

queryA       475:ALQNHENESVYKASLSLIEKYFS: 497
                :*** *********** *******:
8q8k_A_1     456:ALQRHENESVYKASLNLIEKYFS: 478
SecStr          :HGGG SSHHHHHHHHHHHHHH  :    
ExpBur          :ebeeeeeeebbbbbeebbeeebe:

Input Residue Numbers for Focused Sites

ex) 2,15,123