Protein Model on 8g8s_A_1_B_1
(TEMPLATE: 
8g8s
)Protein Model on 8g8s_A_1_B_1
(TEMPLATE: 8g8s
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(IMA1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [426 aa] | Importin subunit alpha-1 :IMA1_MOUSE | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [17 aa] | Nuclear factor NF-kappa-B p100 subunit isoform X1 :F1S861_PIG | 104L 105S 106R 107E 110P 138F 142W 146N 148A 149S 150G 151T 152S 155T 181Q 184W 188N 191G 192D 231W 235N 238R 239N 270D 273W 281G 283N 286I 315R 319N 321V 322T 323G 328T 354E 357W 360S 361N 364A 396E 399W 403N 406S (identity: 100.0 %/94.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8g8s_A_1 identity=94.4% |
queryA 72:GTVNWSVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLL: 171
:******* ******** * * ************************************* *****************************************:
8g8s_A_1 53:GTVNWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLL: 152
SecStr : TT HHHHHHHHTSS HHHHHHHHHHHHHHHHSSS HHHHHHTT HHHHHHHTT TT HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHT:
ExpBur :ebeebeeeebeebbeeeeeeebbebbebbeebbeeeeeebbeebeeeebbeebbebbeeeebeebbbbbbebbbbbbeeeeebbebbbeeebbebbbebb:
Contact : bbbb b b b b bbbbb b
queryA 172:ASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADT: 271
:*********************** ******* ** *********** * ************************* **************** ******* :
8g8s_A_1 153:ASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADS: 252
SecStr :T S HHHHHHHHHHHHHHHTT HHHHHHHHHTT HHHHHHHT SS GGGS HHHHHHHHHHHHHHH SS HHHHHHHHHHHHHHHT S HHHHHHH:
ExpBur :ebeeeebbbbbbebbbbbbeebbebbeebbeeebbeebbeebeeeebeeeeeebbebbbebbbbbbeeeeebbeeebbeebbebbeebbebebeebbbeb:
Contact : b b b bb b b bb b
queryA 272:CWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQ: 371
:*************** **** ************ ************************ *****************************************:
8g8s_A_1 253:CWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQ: 352
SecStr :HHHHHHHHSS HHHHHHHHTTT HHHHHHHHT S HHHHHHHHHHHHHHTTS HHHHHHHHHTTGGGGHHHHTT SSHHHHHHHHHHHHHHTTS HHHHH:
ExpBur :bebbbbbbeeeeebbebbbeeebbebbbebbebeeeebbbbbbebbbbbbebeeebbbebbeeebbeebeebbebeeebbeebbbebbbebbebeeebbe:
Contact : b b b b b b bbb b b b bb b
queryA 372:QVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSIMIEECGGLD: 471
:************ ************* ** **************************** ******* *********************************:
8g8s_A_1 353:QVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLD: 452
SecStr :HHHHTT HHHHHHHHHSS HHHHHHHHHHHHHHHHHS HHHHHHHHHTT HHHHHHGGGSS HHHHHHHHHHHHHHHHHHHHHT HHHHHHHHHHTTHHH:
ExpBur :ebbeeebbeebbebbeeeeeebbbebbebbbbbbeebeeebbeebbebebbebbbebbeeeeeebbebbbebbbbbbebbeeeeeeeebbeebeebebbe:
Contact : b b b b
queryA 472:KIEALQNHENESVYKASLSLIEKYFS: 497
:****** *********** *******:
8g8s_A_1 453:KIEALQRHENESVYKASLNLIEKYFS: 478
SecStr :HHHHHTT S HHHHHHHHHHHHHT :
ExpBur :ebeebeeeeeeebeeebeebbeebbe:
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[assembly_id:1]
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