[pdbjlvh2]Protein Model on 8g4j_B

Protein Model on 8g4j_B_1 (TEMPLATE: 8g4j )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(IMA1_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [423 aa]	Importin subunit alpha :H0VVB1_CAVPO

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8g4j_B_1 identity=94.8%

queryA        75:NWSVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASP: 174
                :** ********** * *********************** ************************************ *************** *******:
8g4j_B_1       1:NWTVDDIVKGINSNNLENQLQATQAARKLLSREKQPPIDHIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGSSEQTKAVVDGGAIPALISLLASP: 100
SecStr          :   HHHHHHHHT SSHHHHHHHHHHHHHHHHH SS  HHHHHHTTHHHHHHHHTT TT HHHHHHHHHHHHHHHHH HHHHHHHHTTTHHHHHHHHTT S:    
ExpBur          :eeebeebeebbebeeeeebbebbebbbebbeeeeebebeebeeeebbeebeebbeeeebbebbebbbebbbbbbeeeeebbebbbeeebbebbbebbebe:    

queryA       175:HAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWA: 274
                :******************************* **************** ********************** **************** * *********:
8g4j_B_1     101:HAHISEQAVWALGNIAGDGSVFRDLVIKYGAIDPLLALLAVPDMSSLAGGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDLEVLADTCWA: 200
SecStr          :SHHHHHHHHHHHHHHHHT HHHHHHHHHTT HHHHHHHT  S TTTS HHHHHHHHHHHHHHS   SS   HHHHHHHHHHHHHHHT S HHHHHHHHHH:    
ExpBur          :eeebbebbbebbbebbeeebebbeebbeeebbeebbebbeeeebeebeeebbebbbebbbbbbeeeeeebeeebbeebbebbeebbebeeeebbbebbeb:    

queryA       275:ISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVV: 374
                :************ ********* ******  ** * ******************* **************  ****************************:
8g4j_B_1     201:ISYLTDGPNERIEMVVKTGVVPHLVKLLGSNELSIMTPALRAIGNIVTGTDEQTQIVIDAGALAVFPSLLVHPKTNIQKEATWTMSNITAGRQDQIQQVV: 300
SecStr          :HHHHHSS HHHHHHHHHHT HHHHHHHHT S HHHHHHHHHHHHHHHTS HHHHHHHHHTTGGGTHHHHTT SSHHHHHHHHHHHHHHHTS HHHHHHHH:    
ExpBur          :bbbbbeeeeebbebbbeeebbebbbebbebeeeebbbbbbebbbbbbebeeebbbebbeeebbeebeebbebeeeebbbbbbebbbebbebeeebbeebb:    

queryA       375:NHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIE: 474
                :****** *********************************************************************************************:
8g4j_B_1     301:NHGLVPILVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIE: 400
SecStr          :HTTHHHHHHHHHHHS HHHHHHHHHHHHHHHHHS HHHHHHHHHTT HHHHHHGGGSS HHHHHHHHHHHHHHHHHHHHHT HHHHHHHHHHTTHHHHHH:    
ExpBur          :eeebbeebbebbeebeeebbeebbebbbebbeebeeebbeebbeeebbebbbebbebeeeebbebbbebbbbbbebbeeeeeeeebbeebeeeebbeebe:    

queryA       475:ALQNHENESVYKASLSLIEKYFS: 497
                :*************** *******:
8g4j_B_1     401:ALQNHENESVYKASLNLIEKYFS: 423
SecStr          :HT  TTSHHHHHHHHHHHHHH  :    
ExpBur          :ebeeeeeeebbebbeebbeebbe:

Protein Model on 8g4j_B_1 (TEMPLATE: 8g4j )

Input Residue Numbers for Focused Sites