[pdbjlvh2]Protein Model on 8fub_A_1_B

Protein Model on 8fub_A_1_B_1 (TEMPLATE: 8fub )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IMA1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [411 aa]	Importin subunit alpha-3 :IMA3_HUMAN
2	b		B 1 (B)	polymer(polypeptide(L)) [11 aa]	Matrix protein :MATRX_HENDH	104L 105S 106R(S) 138F 142W 146N 148A 149S 150G 151T 152S 155T 177H(N) 181Q 184W 188N 191G 192D 231W 235N 238R 239N(H) (identity: 86.4 %/54.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8fub_A_1 identity=54.5%

queryA        77:SVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHA: 176
                :*   **    * *   ** * ********    ****  *  *  *  *  * * *    *** *************** ***   * * *  ** *** :
8fub_A_1      10:SLEAIVQNASSDNQGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQSNAVPLFLRLLHSPHQ: 109
SecStr          : HHHHHHHTT S HHHHHHHHHHHHHHHHSSSS  HHHHHHTTHHHHHHHHTT TT HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHTT SSH:    
ExpBur          :eeeebbeebeeeeeeebeebbeebbeebeeeeeeebeebeeeebbeebbebbeeeebeebbebbbebbbbbbeeeeebbeebbeeebbebbbebbebeee:    
Contact         :                           bbb                               b   b   b bbbbb  b                     

queryA       177:HISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAIS: 276
                :   ********** ***   ** **  * * ***         *     *** **   **** * * **      *** *  * ** *   * ** ** *:
8fub_A_1     110:NVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFIS----PSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNILVDTVWALS: 205
SecStr          :HHHHHHHHHHHHHHTT HHHHHHHHHT  HHHHHTT S----TTS HHHHHHHHHHHHHHHS  SS   HHHHHHHHHHHHHHTT   HHHHHHHHHHHH:    
ExpBur          :ebbbbbbebbbbbbeebeebbeebbeeebbebbbebee----eebeeebbebbbebbbbbbeeeeeebeeebbeebbebbbebbeeebeebbbebbebbb:    
Contact         :b   b  b   b  bb                                      b   b  bb                                     

queryA       277:YLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNH: 376
                :****  ** * **   * ** ** **   *    * **** **************    **  ** *** **  * *** *  ****** * * * *   :
8fub_A_1     206:YLTDAGNEQIQMVIDSGIVPHLVPLLSHQEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKINKEAVWFLSNITAGNQQQVQAVIDA: 305
SecStr          :HHHHT HHHHHHHHHTT HHHHGGGGG SSHHHHHHHHHHHHHHHTS HHHHHHHHTT  GGGSHHHHT SSHHHHHHHHHHHHHHHTS HHHHHHHHHT:    
ExpBur          :ebbeeeeebbebbbeeebbeebbebbeeeeeebbebbbebbbbbbebeeebbbebbeeebbebbeebbebeeeebbeebbebbbebbebeeebbeebbee:    

queryA       377:GLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEAL: 476
                : ***     * * ** ***** **  * *  *   *  **     * *  **** **     * **  ***   **   * *     ******* *** *:
8fub_A_1     306:NLVPMIIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLDGLSNILKMAED--EAETIGNLIEECGGLEKIEQL: 403
SecStr          :T HHHHHHHHHHS HHHHHHHHHHHHHHHHT  HHHHHHHHHTS HHHHHGGGGSS HHHHHHHHHHHHHHHHHT T--THHHHHHHHHHTTHHHHHHHH:    
ExpBur          :ebbeebbebbeebeebbbebbbebbbbbbeebeeebbeebeeeebbbbbbebbebeeeebbebbbebbbbbeeebee--eeeebeeebeebebeeebeeb:    

queryA       477:QNHENESVYKASLSLIE: 493
                :******  **     * :
8fub_A_1     404:QNHENEDIYKLAYEIID: 420
SecStr          :TT SSHHHHHHHHHH  :    
ExpBur          :eeeeeeebbebbeebee:

Protein Model on 8fub_A_1_B_1 (TEMPLATE: 8fub )

Input Residue Numbers for Focused Sites