Protein Model on 8eib_A_1_C_1 (TEMPLATE: 8eib )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(IMA1_HUMAN) A 1 (A) polymer(polypeptide(L)) [496 aa] Catenin beta-1 :CTNB1_HUMAN
2 b C 1 (C) polymer(polypeptide(L)) [15 aa] H329 323G(R) 324T(H) 368D(R) 372Q(L) (identity: 0.0 %/27.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8eib_A_1 identity=27.4%
queryA       118:AGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVF---RDLVIKYGAVDPLLALLA: 214
                :**   * *  *  *            *   * *  *        *   *             *   *         **           *    *   * :
8eib_A_1     144:AGGLQKMVALLNKTNVKFLAITTD-CLQILAYGNQESKLIILASGGPQALVNIMRT---YTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLT: 239
SecStr          :HT HHHHGGGTT   HHHHHHHHH-HHHHHHTT HHHHHHHHHTTHHHHHHHHHHH---   HHHHHHHHHHHHHTTSSTTSSHHHHTTT HHHHT  SS:    
ExpBur          :ebbbeebbebbeeeeeebbbbbbe-bbbbbbeebeebbeebeeeebbebbbebbee---eeeeebbbbbbebbbbbbeeeebbeebbeebbbebbbebee:    

queryA       215:VPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVK--LLGASELPIVTP: 312
                : *           *  *** **      *      *  * *** **  **  *        * **        **   *    **   *       *  *:
8eib_A_1     240:DPSQR-----LVQNCLWTLRNL---SDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEP: 331
SecStr          :   HH-----HHHHHHHHHHHH---TTTTTT    HHHHHHHHHTTT S HHHHHHHHHHHHTTSSS TTGGGTTTTTTHHHHTHHHHHHHSS HHHHHH:    
ExpBur          :eebee-----beebbbebbeeb---bebbbebeebeebbebbbeebeeeeeebbbbbbbbbbebbeebeebbbbbbeeebbebbbebbeebeeeeebbeb:    

queryA       313:ALRAIGNIVTGTDE----QTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQV-VNH------GLVPFLVSVLSKADFKTQKEA--VW: 399
                :*  *         *    *  *    * * *   **  *         *     * *          **      *  * **  *  *   **       :
8eib_A_1     332:AICALRHLTSRHQEAEMAQNAVRLHYG-LPVVVKLLHPP-------SHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSXXX: 423
SecStr          :HHHHHHHHTSSSGGGHHHHHTTTTTTH-HHHHHTTTSTT-------  HHHHHHHHHHHHHHTTSGGGHHHHHHTT HHHHHHHHHHHHHHHHTT  ---:    
ExpBur          :bbbbbebbbbebeebeebbebbeeeeb-beebbebbeee-------bebebbebbbebbebbbebeebbeebeeeebbebbbebbeebbebbeeeee---:    
Contact         :          bb                                               b   b                                    

queryA       400:AVTNYTSGGTVEQIV: 414
                :       *   * **:
8eib_A_1     424:XXXQFVEGVRMEEIV: 438
SecStr          :---  BTTB SHHHH:    
ExpBur          :---eeeeebebeebb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123