Protein Model on 8ech_B_1_A_1
(TEMPLATE: 
8ech
)Protein Model on 8ech_B_1_A_1
(TEMPLATE: 8ech
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(IMA1_HUMAN) | B 1 (E) | polymer(polypeptide(L)) [426 aa] | Importin subunit alpha-1 :IMA1_MOUSE | |
| 2 | b | A 1 (C) | polymer(polypeptide(L)) [11 aa] | Capsid protein C :M1LJY4_9FLAV | 105S 138F 142W 146N 148A 149S 150G 151T 152S 155T 181Q 184W 188N 192D 228N 231W 235N 238R 281G 283N 286I 315R 321V 322T 323G 325D 328T 353K 354E 357W 361N 364A 396E 406S 407G (identity: 100.0 %/94.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8ech_B_1 identity=94.4% |
queryA 72:GTVNWSVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLL: 171
:******* ******** * * ************************************* *****************************************:
8ech_B_1 53:GTVNWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLL: 152
SecStr : SS HHHHHHHHTSS HHHHHHHHHHHHHHHT SS HHHHHHTT HHHHHHHHT TT HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHT:
ExpBur :ebeeeeeeebeebbeeeeeeebbebbebbeebbeeeeeebbeebeeeebbeebbebbeeeebeebbbbbbebbbbbbeeeeebbebbbeeebbebbbebb:
Contact : b b b b bbbbb b
queryA 172:ASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADT: 271
:*********************** ******* ** *********** * ************************* **************** ******* :
8ech_B_1 153:ASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADS: 252
SecStr :T SSHHHHHHHHHHHHHHHHH HHHHHHHHHTT HHHHHHHT S GGGS HHHHHHHHHHHHHHH SS HHHHHHHHHHHHHHHT S HHHHHHH:
ExpBur :ebeeeebbebbbebbbbbbeebbebbeebbeeebbeebbeebeeeebeeeeeebbebbbebbbbbbeeeeeebeeebbeebbebbeebbebebeebbbeb:
Contact : b b b b b b b b
queryA 272:CWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQ: 371
:*************** **** ************ ************************ *****************************************:
8ech_B_1 253:CWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQ: 352
SecStr :HHHHHHHTSS HHHHHHHHTTT HHHHHHHHT S HHHHHHHHHHHHHHHTS HHHHHHHHHTTGGGGHHHHTT SSHHHHHHHHHHHHHHTTS HHHHH:
ExpBur :bebbbbbbeeeeebbebbbeeebbebbbebbebeeeebbebbbebbbbbbebeeebbbebbeeebbeebeebbeeeeeebeebbbbbbbebbebeeebbe:
Contact : b b b b bbb b b bb b b b
queryA 372:QVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSIMIEECGGLD: 471
:************ ************* ** **************************** ******* *********************************:
8ech_B_1 353:QVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLD: 452
SecStr :HHHHTT HHHHHHHHHSS HHHHHHHHHHHHHHHHHS HHHHHHHHHTT HHHHHHGGG S HHHHHHHHHHHHHHHHHHHHHT HHHHHHHHHHTTHHH:
ExpBur :ebbeeebbeebbebbeeeeeebbebbbebbbbbbeebeeebbeebbeeebbebbbebbebeebebbbbbbebbbbbbebbeeeeeeeebbeebeeeebee:
Contact : b bb
queryA 472:KIEALQNHENESVYKASLSLIEKYFS: 497
:****** *********** *******:
8ech_B_1 453:KIEALQRHENESVYKASLNLIEKYFS: 478
SecStr :HHHHHTT SSHHHHHHHHHHHHHH :
ExpBur :ebeebeeeeeeebeebbeebbeebbe:
|
[assembly_id:1]
[help]