[pdbjlvh2]Protein Model on 7vps_B

Protein Model on 7vps_B_1 (TEMPLATE: 7vps )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(IMA1_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [438 aa]	Importin subunit alpha :Q6FNI4_CANGA

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7vps_B_1 identity=48.0%

queryA        72:GTVNWSVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLL: 171
                :*         *  ****    ** **   *  ****  ****  *  *  *  * *         * * ************ **  *** ** * ** **:
7vps_B_1      15:GQLQQELPQMVQQINSSDMQEQLAATVKFRQILSREHNPPIDIVIQSGVVPTLVNFMNENQPEMLQLEAAWALTNIASGTSAQTQVVVDAGAVPLFIQLL: 114
SecStr          :HHHHHHHHHHHHHHT S HHHHHHHHHHHHHHHH SS   HHHHHTTT HHHHHHTTSTTS HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHH:    
ExpBur          :eebeeebeebeebbeeeeeeebbebbeebbebbeeeeeebbeebbebebbebbbebbeeeeeeebbbbbbebbbbbbeeeeebbeebbeeebbebbbebb:    

queryA       172:ASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADT: 271
                :        *** ***** ***    ** *    *  * * *       *      *  ********* * * *    *   ****  *    * * * * :
7vps_B_1     115:YTGSVELQEQAIWALGNVAGDSTSYRDYVLQCSAMEPILSLF-----NSEKVTLIRTATWTLSNLCRGKKPQPDWSIVSKALPTLAKLIYSFDNETLIDA: 209
SecStr          :HHS HHHHHHHHHHHHHHHTT HHHHHHHHHTT HHHHHHGG-----GS  HHHHHHHHHHHHHHH  SSS   HHHHGGGHHHHHHHTT S HHHHHHH:    
ExpBur          :eebeeebbebbbebbbbbbeeeeebbeebbeeebbebbbebb-----eeeeeebbebbbebbbbbbeeeeeebeeeebeebbeebbebbeeeeeebbbbb:    

queryA       272:CWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQ: 371
                :******* *** * *  *        ** **        ****** ****** *  *****  * *     **  **  * *** ** ******   ***:
7vps_B_1     210:CWAISYLSDGPAEAIQAVIDARIPKRLVELLSHQSTLVQTPALRAVGNIVTGNDLHTQVVINCGVLSALRNLLSSPKESIRKEACWTISNITAGNTEQIQ: 309
SecStr          :HHHHHHHTSS HHHHHHHHHTT HHHHHHHTT S HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHTT SSHHHHHHHHHHHHHHHSS HHHHH:    
ExpBur          :bebbbebbeeeeebbeebbeeebbebbbebbeeeeeebbebbbebbbbbbeeeeebbeebbeeebbebbeebbebeeeebeeebbebbbebbeeeeebbe:    

queryA       372:QVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTV--EQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSI-----MI: 464
                : **   * * *   *  *  *  *** **  *  ***    * * * *  * * **  **   *  ** * ***  **    *   *   * *      *:
7vps_B_1     310:AVVDANLIPPLIKLLETAEYKIKKEACWAISNASSGGLQRPEIIRYMVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGETDKEARGLAINENADLI: 409
SecStr          :HHHHTT HHHHHHHHHHS HHHHHHHHHHHHHHTSSSSSSHHHHHHHHHTT HHHHHHTTTTS HHHHHHHHHHHHHHHHHHHHHHHHH     HHHHHH:    
ExpBur          :ebbeeebbbbbbebbeebeeebbebbbebbbbbbeebeeeeebbeebbeeebbebbbebbeebeeebbbbbbebbbbbbebbeeeeeeeeeeebebbeeb:    

queryA       465:EECGGLDKIEALQNHENESVYKASLSLIEKYFSVE: 499
                :*  **  **   *  **   *      ** **  *:
7vps_B_1     410:EKAGGMEKIFNCQQNENDRIYEKAYKIIETYFGEE: 444
SecStr          :HHTTHHHHHHGGGG S HHHHHHHHHHHHHHS   :    
ExpBur          :eebebeebbeebeeeeeeebeeebeebbeebbeee:

Protein Model on 7vps_B_1 (TEMPLATE: 7vps )

Input Residue Numbers for Focused Sites