[pdbjlvh2]Protein Model on 7sqc_WE_1_XF

Protein Model on 7sqc_WE_1_XF_1 (TEMPLATE: 7sqc )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IMA1_HUMAN)	WE 1 (K2)	polymer(polypeptide(L)) [467 aa]	PF16 :A0A2K3DEG1_CHLRE
2	b		XF 1 (O1)	polymer(polypeptide(L)) [673 aa]	FAP74 :CFA74_CHLRE	123K(S) 126S(T) 129G(E) 130R(E) 131T(F) 134S(P) 172A(Q) 173S(E) 174P 175H(E) (identity: 10.0 %/25.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7sqc_WE_1 identity=25.2%

queryA        75:NWSVDDIVKGINSSNVENQL------------QATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGG: 162
                :* * **            **            **         *         *  *     *  *   *       *** *  **    *    *** *:
7sqc_WE_1     70:NYS-DDLAEAVVQNEILPQLVYSLSEQNRFYKQAAAFCLRAVARHSPELAQSVIDSGALDSLVTCLEEFD-PGVKEASAWTLGYIAGHNAELAQQVVDAG: 167
SecStr          :TT -HHHHHHHHHTTHHHHHHHHHHSS HHHHHHHHHHHHHHHHS HHHHHHHHHTTHHHHHHHHHTSS -HHHHHHHHHHHHHHHTS HHHHHHHHHHT:    
ExpBur          :eee-eebbeebeeeebbebbbebbbeeeeebbebbbebbbbbbebbeebbebbbeeebbebbbebbeeee-eebbbbbbebbbebbbeeeebbeebbeee:    
Contact         :                     b  bbb                                 b  b  bbb  b                            

queryA       163:AIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHH: 262
                :* *        *       *  **  *          *   ***  *  *    *         *     **                 * *     *  :
7sqc_WE_1    168:AVPLLVLCVQEPELSLKRIAASALSDISKHTPELAQAVVDAGAVAYLAPLVINQDAK-----LKRQVCCALSQIAKHSVDLAEVVVGAEIFPKILTCLKF: 262
SecStr          : HHHHHHHHHSS HHHHHHHHHHHHHHHSS HHHHHHHHHSS HHHHGGGGSSS HH-----HHHHHHHHHHHHHTS HHHHHHHHHT  HHHHHHHTTS:    
ExpBur          :bbeebbebbeeeeeebbbbbbbbbbbbbeebeebbeebbeeebbeebbebbeeeeee-----bbebbbbbbbebbebeeebbeebeeeebbebbbebbee:    
Contact         :         bbbb                                                                                       

queryA       263:DDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTN-PKTNIQKEATWTMSN: 361
                : *  *                *    **  * *  **     *      *   * * *          **   **    * *   *         **   :
7sqc_WE_1    263:PDEFVKKHSATVVREVAKHTPELAQLVVGNGGVGALVDYISDSAGNNRLPGIMALGYIAAFSETLALSVIAEKALPPLVSALNEEPEDHLKSATAWTLGQ: 362
SecStr          :S HHHHHHHHHHHHHHHHH HHHHHHHHHHT HHHHHHHHHT  STTHHHHHHHHHHHHTT HHHHHHHHHTT HHHHHHHHHT   HHHHHHHHHHHHH:    
ExpBur          :eeeebbeebbebbbbbbeeeeebbeebeeeebbebbbebbeebeeebbbbbbebbbbbbbeeeebbeebbeeebbebbbebbeeeeeeebbbbbbebbbb:    

queryA       362:ITAGRQDQIQQVVNHGLVPFLVSVLSKA----DFKTQ: 394
                :*     *    *   *    ***  *      * ** :
7sqc_WE_1    363:IGRXXPDHAKAVADTGCLATLVSLESXXXXSDDLKTK: 399
SecStr          :HH -- HHHHHHHHHTHHHHHHHHH ---- HHHHHH:    
ExpBur          :bbe--eebbeebbeeebeebbeebee----eeebbee:

Protein Model on 7sqc_WE_1_XF_1 (TEMPLATE: 7sqc )

Input Residue Numbers for Focused Sites