Protein Model on 7sqc_DE_1_JJ_1 (TEMPLATE: 7sqc )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(IMA1_HUMAN) DE 1 (G3) polymer(polypeptide(L)) [466 aa] PF16 :A0A2K3DEG1_CHLRE
2 b JJ 1 (T1) polymer(polypeptide(L)) [562 aa] FAP47 :A0A2K3CP55_CHLRE 95Q 96A 99A(F) 129G(E) 130R(E) 131T(F) 132D 139E(A) 169S(L) 170L(C) 172A(Q) 173S(E) 174P 175H(E) 176A(L) 180E(R) 184W(S) 187G(S) 188N(D) 191G(K) 192D(H) 216P(Q) 217D 219S(K) 227R 228N(Q) 231W(C) 263D(P) 307L(G) 308P(N) 350N(H) (identity: 19.4 %/25.2 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7sqc_DE_1 identity=25.2%
queryA        75:NWSVDDIVKGINSSNVENQL------------QATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGG: 162
                :* * **            **            **         *         *  *     *  *   *       *** *  **    *    *** *:
7sqc_DE_1     70:NYS-DDLAEAVVQNEILPQLVYSLSEQNRFYKQAAAFCLRAVARHSPELAQSVIDSGALDSLVTCLEEFD-PGVKEASAWTLGYIAGHNAELAQQVVDAG: 167
SecStr          :HH -HHHHHHHHHTT HHHHHTT SS  HHHHHHHHHHHHHHHTT HHHHHHHHHTTHHHHHHHHHHSS -HHHHHHHHHHHHHHHTT HHHHHHHHHTT:    
ExpBur          :eee-eebbebbeeeebbeebbebbeeeeeebbebbbbbbebbbeebeebbebbbeeebbebbbebbeeeb-ebbbebbbebbbebbeeeeebbeebbebe:    
Contact         :                             b  bb  b                             bbbb      b                       

queryA       163:AIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHH: 262
                :* *        *       *  **  *          *   ***  *  *    *         *     **                 * *     *  :
7sqc_DE_1    168:AVPLLVLCVQEPELSLKRIAASALSDISKHTPELAQAVVDAGAVAYLAPLVINQDAK-----LKRQVCCALSQIAKHSVDLAEVVVGAEIFPKILTCLKF: 262
SecStr          : HHHHHHHHHS  HHHHHHHHHHHHHHHTS HHHHHHHHHHTHHHHHGGGGT   HH-----HHHHHHHHHHHHHSS HHHHHHHHHT  HHHHHHHTSS:    
ExpBur          :bbeebbebbebeeeebbebbbebbbbbbeeeeebbeebbeeebbeebbebbeeeebe-----bbeebbebbbbbbebeeebbeebbebebbebbbebbeb:    
Contact         :      bb bbbbb   b   b  bb  bb                       bb b       bb  b                               

queryA       263:DDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTN-PKTNIQKEATWTMSN: 361
                : *  *                *    **  * *  **     *      *   * * *          **   **    * *   *         **   :
7sqc_DE_1    263:PDEFVKKHSATVVREVAKHTPELAQLVVGNGGVGALVDYISDSAGNNRLPGIMALGYIAAFSETLALSVIAEKALPPLVSALNEEPEDHLKSATAWTLGQ: 362
SecStr          :S HHHHHHHHHHHHHHHTS THHHHHHHHHTHHHHHHHHHHH  TGGGHHHHHHHHHHHTT HHHHHHHHHTT HHHHHHHHHH   HHHHHHHHHHHHH:    
ExpBur          :eeeebbebbbbbbbbbbebeeebbeebeeeebbebbbebbeebeeebbbbbbbbbbebbeeeeebbeebbeeebbebbbebbeeeeeeebebbbbebbbe:    
Contact         :b                                           bb                                          b           

queryA       362:ITAGRQDQIQQVVNHGLVPFLVSV----LSKADFKTQ: 394
                :*     *    *   *    ***      *  * ** :
7sqc_DE_1    363:IGRXXPDHAKAVADTGCLATLVSLEXXXASSDDLKTK: 399
SecStr          :HH -- HHHHHHHHHTHHHHHHHH --- HHHHHHHH:    
ExpBur          :bbe--eebbebbeeeebeeebeeee---eebeeebee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123