[pdbjlvh2]Protein Model on 7n6g_E_1_PB

Protein Model on 7n6g_E_1_PB_1 (TEMPLATE: 7n6g )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IMA1_HUMAN)	E 1 (0E)	polymer(polypeptide(L)) [499 aa]	PF16 :A0A2K3DEG1_CHLRE
2	b		PB 1 (2X)	polymer(polypeptide(L)) [167 aa]	Unknown protein	131T(F) 169S(L) 172A(Q) 173S(E) 174P (identity: 20.0 %/25.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7n6g_E_1 identity=25.2%

queryA        75:NWSVDDIVKGINSSNVENQL------------QATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGG: 162
                :* * **            **            **         *         *  *     *  *   *       *** *  **    *    *** *:
7n6g_E_1      70:NYS-DDLAEAVVQNEILPQLVYSLSEQNRFYKQAAAFCLRAVARHSPELAQSVIDSGALDSLVTCLEEFD-PGVKEASAWTLGYIAGHNAELAQQVVDAG: 167
SecStr          :HH -HHHHHHHHHHTHHHHHHHHHHSS HHHHHHHHHHHHHHHHH HHHHHHHHHHS HHHHHHHHH SS-TTHHHHHHHHHHHHHHS HHHHHHHHHH :    
ExpBur          :eee-eebbebbeeeebbebbbebbebeeeebbebbbebbbbbbeebeebbebbbeebebeebbebbebee-eebbbbbbebbbebbebebebbeebeeeb:    
Contact         :                         bb b                                       b                               

queryA       163:AIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHH: 262
                :* *        *       *  **  *          *   ***  *  *    *         *     **                 * *     *  :
7n6g_E_1     168:AVPLLVLCVQEPELSLKRIAASALSDISKHTPELAQAVVDAGAVAYLAPLVINQDAK-----LKRQVCCALSQIAKHSVDLAEVVVGAEIFPKILTCLKF: 262
SecStr          : HHHHHHHHHSS HHHHHHHHHHHHHHHHH HHHHHHHHHHTHHHHHHHHHHS  HH-----HHHHHHHHHHHHHHH HHHHHHHHHHT HHHHHHHHS :    
ExpBur          :bbebbbebbeeeeeebbebbbbbbbebbeebeebbeebbeeebbeebbebbeeeeee-----bbbbbbbbbbebbebeeebbeebbeeebbebbbebbee:    
Contact         :      b  bbb                                                                                        

queryA       263:DDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTN-PKTNIQKEATWTMSN: 361
                : *  *                *    **  * *  **     *      *   * * *          **   **    * *   *         **   :
7n6g_E_1     263:PDEFVKKHSATVVREVAKHTPELAQLVVGNGGVGALVDYISDSAGNNRLPGIMALGYIAAFSETLALSVIAEKALPPLVSALNEEPEDHLKSATAWTLGQ: 362
SecStr          :SSHHHHHHHHHHHHHHHHH HHHHHHHHHHTHHHHHHHHHHTS HHHHHHHHHHHHHHHHH HHHHHHHHHHT HHHHHHHHHS S HHHHHHHHHHHHH:    
ExpBur          :eeeebbebbbbbbebbbebbeebbeebbeeebbbbbbebbeeeebebbebbbbbbbebbeeeeebbebbeeeebbebbbebbeebebeebbbbbbbbbbb:    

queryA       362:ITAGRQDQIQQVVNHGLVPFLVSVLSKA----DFKTQ: 394
                :*     *    *   *    ***  *      * ** :
7n6g_E_1     363:IGRHTPDHAKAVADTGCLATLVSLESDGASSDDLKTK: 399
SecStr          :HHHH HHHHHHHHHHTHHHHHHHHHHHTTTTTTHHHH:    
ExpBur          :bbeebeebbeebbeeebbebbeebeeeeebeeebeeb:

Protein Model on 7n6g_E_1_PB_1 (TEMPLATE: 7n6g )

Input Residue Numbers for Focused Sites