Protein Model on 7lfc_A_1_B_1
(TEMPLATE: 
7lfc
)Protein Model on 7lfc_A_1_B_1
(TEMPLATE: 7lfc
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(IMA1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [414 aa] | Importin subunit alpha-3 :IMA3_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [12 aa] | Nuclear factor NF-kappa-B p105 subunit :NFKB1_HUMAN | 101R 102K 104L 105S 107E(D) 108K(R) 110P 142W 146N 148A 149S 150G 151T 152S 155T 181Q 184W 188N 191G 192D 228N 231W 234S(V) 235N 238R 270D 273W 277Y 308P(K) 315R (identity: 86.7 %/54.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7lfc_A_1 identity=54.3% |
queryA 77:SVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHA: 176
:* ** * * ** * ******** **** * * * * * * * *** *************** *** * * * ** *** :
7lfc_A_1 72:SLEAIVQNASSDNQGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQSNAVPLFLRLLHSPHQ: 171
SecStr : HHHHHHHHT SSHHHHHHHHHHHHHHHHSSSS HHHHHHHTHHHHHHHHTT TT HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHTT S H:
ExpBur :eeeebbeebeeeeeeebeebbeebbeebeeeeeeebeebeebebbebbbebbeeeebeebbebbbebbbbbbeeeeebbeebbeeebbebbbebbebeee:
Contact : bb bb bb b b b bbbbb b
queryA 177:HISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAIS: 276
: ********** *** ** ** * * *** * *** ** **** * * ** *** * * ** * * ** ** *:
7lfc_A_1 172:NVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFIS----PSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNILVDTVWALS: 267
SecStr :HHHHHHHHHHHHHHTT HHHHHHHHHTT HHHHHTT S----TTS HHHHHHHHHHHHHHHS SS HHHHHHHHHHHHHHTT HHHHHHHHHHHH:
ExpBur :ebbbbbbebbbbbbeebbebbeebbeeebbebbbebee----eebeeebbebbbebbbbbbeeeeeebeeebbeebbebbbebbeeebeebbbebbebbb:
Contact : b b b bb b b bb b b b
queryA 277:YLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNH: 376
:**** ** * ** * ** ** ** * * **** ************** ** ** *** ** * *** * ****** * * * * :
7lfc_A_1 268:YLTDAGNEQIQMVIDSGIVPHLVPLLSHQEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKINKEAVWFLSNITAGNQQQVQAVIDA: 367
SecStr :HHTTS HHHHHHHHHTT HHHHGGGGG SSHHHHHHHHHHHHHHHTS HHHHHHHHTTTGGGGHHHHHT S HHHHHHHHHHHHHHHTS HHHHHHHHHT:
ExpBur :ebbeeeeebbebbbeeebbeebbebbebeeeebbebbbebbbbbbebeeebbeebbebebbebbeebbebeeeebbebbbebbbebbebeeebbeebbee:
Contact :b b b
queryA 377:GLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEAL: 476
: *** * * ** ***** ** * * * * ** * * **** ** * ** *** ** * * ******* *** *:
7lfc_A_1 368:NLVPMIIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLDGLSNILKMAED--EAETIGNLIEECGGLEKIEQL: 465
SecStr :T HHHHHHHHHHS HHHHHHHHHHHHHHTTT HHHHHHHHHTT HHHHHGGGG S HHHHHHHHHHHHHHHHT GG--GHHHHHHHHHHHTHHHHHHHH:
ExpBur :ebbeebbebbeeeeebbbebbbebbbbbbeebeeebbbebbeeebbebbbebbeeeeeebbbbbbebbbebbeebee--ebeebbeebeeeebbeebeeb:
queryA 477:QNHENESVYKASLSLIEKYF: 496
:****** ** * *:
7lfc_A_1 466:QNHENEDIYKLAYEIIDQFF: 485
SecStr :TT SSHHHHHHHHHHHHHH :
ExpBur :eeeeeeebbebbeebeeeee:
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[assembly_id:1]
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