[pdbjlvh2]Protein Model on 7lf4_C_1_D

Protein Model on 7lf4_C_1_D_1 (TEMPLATE: 7lf4 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IMA1_HUMAN)	C 1 (C)	polymer(polypeptide(L)) [416 aa]	Importin subunit alpha-3 :IMA3_HUMAN
2	b		D 1 (D)	polymer(polypeptide(L)) [14 aa]	Transcription factor p65 :TF65_HUMAN	240K 280D 315R 319N 321V 323G 325D 328T 353K 357W 360S 361N 364A 396E 399W 402T(S) 403N 406S(I) 442D (identity: 89.5 %/54.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7lf4_C_1 identity=54.5%

queryA        77:SVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHA: 176
                :*   **    * *   ** * ********    ****  *  *  *  *  * * *    *** *************** ***   * * *  ** *** :
7lf4_C_1      72:SLEAIVQNASSDNQGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQSNAVPLFLRLLHSPHQ: 171
SecStr          :  STTTTGGG SSHHHHHHHHHHHHHHHHSSSS  HHHHHHTTHHHHHHHHTT TT HHHHHHHHHHHHHHTTS HHHHHHHHHTT HHHHHHHTT S H:    
ExpBur          :eeeeeeeebeeeeeeebeebbeebbeebeeeeebebeebeeeebbeebbebbebeeeeebbebbbebbbebbeeeeebbebbbeeebbeebbebbeeeee:    

queryA       177:HISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAIS: 276
                :   ********** ***   ** **  * * ***         *     *** **   **** * * **      *** *  * ** *   * ** ** *:
7lf4_C_1     172:NVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFIS----PSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNILVDTVWALS: 267
SecStr          :HHHHHHHHHHHHHHTT HHHHHHHHHTT HHHHHHT S----TT  HHHHHHHHHHHHHHH   SS   HHHHHHHHHHHHHHTT   HHHHHHHHHHHH:    
ExpBur          :ebbebbbebbbbbbeebbebbeebbeeebbeebeeeee----eebeeebbebbbebbbbbbeeeeeebeeebbebbbebbeebbeeeeeebbbbbbebbb:    
Contact         :                                                               b                                    

queryA       277:YLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNH: 376
                :****  ** * **   * ** ** **   *    * **** **************    **  ** *** **  * *** *  ****** * * * *   :
7lf4_C_1     268:YLTDAGNEQIQMVIDSGIVPHLVPLLSHQEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKINKEAVWFLSNITAGNQQQVQAVIDA: 367
SecStr          :HHHHT HHHHHHHHHTT HHHHGGGGG SSHHHHHHHHHHHHHHHTS HHHHHHHHHTT GGGHHHHHT SSHHHHHHHHHHHHHHHTS HHHHHHHHHT:    
ExpBur          :ebbeeeeebbebbbeeebbeebbebbeeeeeebbebbbebbbbbbeeeeebbeebbeeebbebbeebbebeeeebbebbbebbbebbebeeebbeebbee:    
Contact         :   b                                  b   b b b b  b                        b   b  bb  b            

queryA       377:GLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEAL: 476
                : ***     * * ** ***** **  * *  *   *  **     * *  **** **     * **  ***   **   * *     ******* *** *:
7lf4_C_1     368:NLVPMIIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLDGLSNILKMAED--EAETIGNLIEECGGLEKIEQL: 465
SecStr          :THHHHHHHHHHHS HHHHHHHHHHHHHHHHH  HHHHHHHHHTT HHHHHHGGG S HHHHHHHHHHHHHHHHHTSS--SHHHHHHHHHHTTHHHHHHHH:    
ExpBur          :ebbeebbebbeeeeeebbbbbbebbbbbbeebeeebbeebbeeebbebbbebbeeeeeebbebbbebbbebbeeeee--ebeebbeebeeeebbeebeeb:    
Contact         :                   b  b  bb  b                                   b                                  

queryA       477:QNHENESVYKASLSLIEKYFS: 497
                :******  **     *   **:
7lf4_C_1     466:QNHENEDIYKLAYEIIDQFFS: 486
SecStr          :TT S HHHHHHHHHHHHHH  :    
ExpBur          :eeeeeeebeebbeebbeebbe:

Protein Model on 7lf4_C_1_D_1 (TEMPLATE: 7lf4 )

Input Residue Numbers for Focused Sites