Protein Model on 7lf4_A_1_B_1
(TEMPLATE: 
7lf4
)Protein Model on 7lf4_A_1_B_1
(TEMPLATE: 7lf4
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(IMA1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [416 aa] | Importin subunit alpha-3 :IMA3_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [11 aa] | Nuclear factor NF-kappa-B p105 subunit :NFKB1_HUMAN | 101R 102K 104L 105S 106R(S) 107E(D) 108K(R) 110P 138F 142W 146N 148A 149S 150G 151T 155T 181Q 184W 188N 191G 192D 228N 231W 234S(V) 235N 238R 270D 273W 277Y 308P(K) (identity: 83.3 %/54.5 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7lf4_A_1 identity=54.5% |
queryA 77:SVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHA: 176
:* ** * * ** * ******** **** * * * * * * * *** *************** *** * * * ** *** :
7lf4_A_1 72:SLEAIVQNASSDNQGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQSNAVPLFLRLLHSPHQ: 171
SecStr : S HHHHTT SSHHHHHHHHHHHHHHHHSSSS HHHHHHTT HHHHHHHTT TT HHHHHHHHHHHHHHTTS HHHHHHHHHTT HHHHHHHTT S H:
ExpBur :eeeebeeebeeeeeeebbebbebbbeebeeeeeeebeebeeeebbeebbebbeeeebeebbbbbbebbbbbbeeeeebbebbbeeebbebbbebbebeee:
Contact : bb bbbbb b b b b bbbb b
queryA 177:HISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAIS: 276
: ********** *** ** ** * * *** * *** ** **** * * ** *** * * ** * * ** ** *:
7lf4_A_1 172:NVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFIS----PSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNILVDTVWALS: 267
SecStr :HHHHHHHHHHHHHHTT HHHHHHHHHTT HHHHHHT ----TTS HHHHHHHHHHHHHHT SSS HHHHHHHHHHHHHHTT S HHHHHHHHHHHH:
ExpBur :ebbbbbbebbbbbbeebbebbeebbeeebbebbbebee----eebeeebbebbbebbbbbbeeeeeebeeebbeebbebbeebbeeeeeebbbbbbbbbb:
Contact : b b b bb b b bb b b b
queryA 277:YLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNH: 376
:**** ** * ** * ** ** ** * * **** ************** ** ** *** ** * *** * ****** * * * * :
7lf4_A_1 268:YLTDAGNEQIQMVIDSGIVPHLVPLLSHQEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKINKEAVWFLSNITAGNQQQVQAVIDA: 367
SecStr :HHHHH HHHHHHHHHTT HHHHGGGGG SSHHHHHHHHHHHHHHHTS HHHHHHHHHTTGGGGHHHHHS SSHHHHHHHHHHHHHHHTS HHHHHHHHHT:
ExpBur :ebbebeeebbebbbeeebbeebbebbeeeeeebbbbbbebbbbbbeeeeebbeebbeeebbebbeebbebeeeebbebbbebbbebbebeeebbeebbee:
Contact :b b
queryA 377:GLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEAL: 476
: *** * * ** ***** ** * * * * ** * * **** ** * ** *** ** * * ******* *** *:
7lf4_A_1 368:NLVPMIIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLDGLSNILKMAED--EAETIGNLIEECGGLEKIEQL: 465
SecStr :THHHHHHHHHHHS HHHHHHHHHHHHHHHHH HHHHHHHHHTT HHHHHHGGG S HHHHHHHHHHHHHHHHH SS--SHHHHHHHHHHTTHHHHHHHH:
ExpBur :ebbeebbebbeeeeebbbebbbebbbebbeebeeebbeebeeeebbebbbebbeeebeebbebbbebbbebbeebee--ebeebbeebeeeebbebbeeb:
queryA 477:QNHENESVYKASLSLIEKYFS: 497
:****** ** * **:
7lf4_A_1 466:QNHENEDIYKLAYEIIDQFFS: 486
SecStr :TT SSHHHHHHHHHHHHHH :
ExpBur :eeeeeeebeeebeebbeebbe:
|
[assembly_id:1]
[help]