[pdbjlvh2]Protein Model on 7let_A_1_C

Protein Model on 7let_A_1_C_1 (TEMPLATE: 7let )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IMA1_HUMAN)	A 1 (E)	polymer(polypeptide(L)) [423 aa]	Importin subunit alpha-1 :IMA1_MOUSE
2	b		C 1 (C)	polymer(polypeptide(L)) [6 aa]	Transcription factor p65 :TF65_HUMAN	280D 281G 283N 286I 315R 319N 321V 322T 323G 328T 354E 357W 360S 361N 363T 364A 365G 396E 399W 403N 406S 407G (identity: 100.0 %/94.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7let_A_1 identity=94.3%

queryA        75:NWSVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASP: 174
                :**** ******** * * ************************************* ********************************************:
7let_A_1       6:NWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASP: 105
SecStr          :   HHHHHHHHTT  HHHHHHHHHHHHHHHT SSS  HHHHHHTTHHHHHHHHHT TT HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHTT S:    
ExpBur          :eeeeeebeebbeeeeeeebbebbebbbebbeeeeeebbeebeeeebbeebbebbeeeebeebbebbbebbbbbbeeeeebbebbbeeebbebbbebbebe:    

queryA       175:HAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWA: 274
                :******************** ******* ** *********** * ************************* **************** ******* ***:
7let_A_1     106:HAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWA: 205
SecStr          :SHHHHHHHHHHHHHHHTT HHHHHHHHHTT HHHHHHTT  S GGGS HHHHHHHHHHHHHHS   SS   HHHHHHHHHHHHHHHTSS HHHHHHHHHH:    
ExpBur          :eeebbebbbebbbbbbeebbebbeebbeeebbeebbeebeeeebeebeeebbebbbebbbbbbeeeeeebeeebbeebbebbbebbebebeebbbebbeb:    

queryA       275:ISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVV: 374
                :************ **** ************ ************************ ********************************************:
7let_A_1     206:ISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVV: 305
SecStr          :HHHHTSS HHHHHHHHTTTHHHHHHHHHT S HHHHHHHHHHHHHHTTS HHHHHHHHHTTGGGGHHHHHT SSHHHHHHHHHHHHHHHTS HHHHHHHH:    
ExpBur          :bbebbeeeeebbeebbeeebbebbbebbeeeeeebbbbbbebbbbbbebeeebbbebbeeebbebbeebbeeeeeebbebbbebbbebbebeeebbeebb:    
Contact         :     bb b  b                            b   b bbb    b                         b  b  bb bbb         

queryA       375:NHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIE: 474
                :********* ************* ** **************************** ******* ************************************:
7let_A_1     306:NHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIE: 405
SecStr          :HTTHHHHHHHHHHSS HHHHHHHHHHHHHHHHHS HHHHHHHHHTT HHHHHHGGGSS HHHHHHHHHHHHHHHHHHHHHT HHHHHHHHHTTTHHHHHH:    
ExpBur          :eeebbeebbebbeeeeeebbeebbebbbbbbeebbeebbeebbeeebbebbbebbebeeeebbebbbebbebbbebbeeeeeeeebbeebeebebeeebe:    
Contact         :                     b  b   b  bb                                                                   

queryA       475:ALQNHENESVYKASLSLIEKYFS: 497
                :*** *********** *******:
7let_A_1     406:ALQRHENESVYKASLNLIEKYFS: 428
SecStr          :HHTSSS HHHHHHHHHHHHHH  :    
ExpBur          :ebbeeeeeebeeebeebbeebbe:

Protein Model on 7let_A_1_C_1 (TEMPLATE: 7let )

Input Residue Numbers for Focused Sites