[pdbjlvh2]Protein Model on 5mfk_A_1_C

Protein Model on 5mfk_A_1_C_1 (TEMPLATE: 5mfk )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IMA1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [239 aa]	YIII(Dq.V1)4CPAF
2	b		C 1 (C)	polymer(polypeptide(L)) [8 aa]	(KR)4	322T(S) 323G 357W 361N 364A(S) 365G 367Q(N) 370I 395K 396E 399W 403N 406S 407G 413I 442D(W) 446N 449Q(S) (identity: 72.2 %/35.6 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5mfk_A_1 identity=35.6%

queryA       253:LPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQ: 352
                :**  *  *   *   *       *    * ** *      *    *****          *  ** **  *  ** *  * ****     **        :
5mfk_A_1       6:LPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQKLIEAGALSPLVKLLDDASEEVIKEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVI: 105
SecStr          :HHHHHHGGG S HHHHHHHHHHHHHHHTS HHHHHHHHHTT HHHHHHTTS S HHHHHHHHHHHHHHTTS HHHHHHHHHTT HHHHHHGGG S HHHH:    
ExpBur          :beebbebbebeeeeebeebbeebbebbeeeeeebeebbeeebbeebbebbeeebeebbebbbebbbbbbebeeebbeebbebebbebbbebbeeeeeebb:    
Contact         :                                                                     bb                             

queryA       353:KEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAE: 452
                :*** *   **  *   ***     *    **  *  *     ******  *  **   ***  *   *   **  **       *     ** **     :
5mfk_A_1     106:KEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVIKEAVWAIANIASGNN-EQIQKLIEAGALSPLVKLLDDASEEVIKEAVWAIANIASGNN: 204
SecStr          :HHHHHHHHHHTTS HHHHHHHHHTT HHHHHHTTSSS HHHHHHHHHHHHHHHTS H-HHHHHHHHTT HHHHHHGGG S HHHHHHHHHHHHHHHSS H:    
ExpBur          :bbbbebbbbbbebeeebbeebbeeebbebbbebbeeebeebbeebbebbbbbbebee-ebbeebbeeebbebbbebbeeebeebbbbbbebbbbbbeeee:    
Contact         :    b   b  bb b  b                        bb  b   b  bb     b                            b   b  b   

queryA       453:KLGETEKLSIMIEECGGLDKIEALQNHENESVYKASLSLIEKY: 495
                :            ** * *   * ** * ** * *      *  :
5mfk_A_1     205:EMKQK------LEEAGALPALEKLQSHANEEVQKNAQAALEAF: 241
SecStr          :HHHHH------HHHHTHHHHHHHGGG S HHHHHHHHHHHHHH:    
ExpBur          :ebbee------beeeebbebbeebeeeebeebeeebeebbeeb:

Protein Model on 5mfk_A_1_C_1 (TEMPLATE: 5mfk )

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