[pdbjlvh2]Protein Model on 5mfg_D_1_C

Protein Model on 5mfg_D_1_C_1 (TEMPLATE: 5mfg )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IMA1_HUMAN)	D 1 (D)	polymer(polypeptide(L)) [241 aa]	YIIIM5AII
2	b		C 1 (C)	polymer(polypeptide(L)) [270 aa]	YIIIM5AII	367Q(N) 370I 371Q 374V(I) 379V(L) 383V 386L 391F(E) 394Q(L) 395K(Q) 398V(L) 402T(S) 404Y(I) 405T(A) 406S 407G (identity: 37.5 %/39.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5mfg_D_1 identity=39.1%

queryA       164:IPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAV--EQILPTLVRLLH: 261
                : *     * **       *   *  **  *      **  **   *  **  *         *    * ***     *    * **     ** ** ** :
5mfg_D_1       6:LPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQ-----ILQEALWALSNIASGGNEQ--IQAVIDAGALPALVQLLS:  98
SecStr          :HHHHHHHTT S HHHHHHHHHHHHHHHTT HHHHHHHHHTT HHHHHHGGG S HH-----HHHHHHHHHHHHTTS HHH--HHHHHHHT HHHHHHGGG:    
ExpBur          :beebbeebebeeeeebbebbeebbeebeeeeeebeebbeeebbebbeebbebeeee-----bbebbbebbbbbbebeeeb--bbbbbeeebbebbbebbe:    

queryA       262:HDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSN: 361
                :      *    ** *    * ** *  *   *  * ** **      *   ** *  **  *  ** * *******     **  *   *  ** *  **:
5mfg_D_1      99:SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSN: 198
SecStr          : S HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHHH:    
ExpBur          :beeeebbebbbebbbbbbebbeebbebbbeeebbeebeebbebeeeebbebbbebbbbbbebbeebbbbbbeeebbebbbebbebeeeebbebbbebbbe:    

queryA       362:ITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGG: 408
                :*  *   *** *   *  * **  **        ** **  *  ***:
5mfg_D_1     199:IASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGG: 245
SecStr          :HHTS HHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHHHHTT  :    
ExpBur          :bbebbeebbebbeeeebeebbeebeebeeeebeebbeebeeebeeee:    
Contact         :     b  bb  b    b   b  b    b  bb  b   b bbbb

Protein Model on 5mfg_D_1_C_1 (TEMPLATE: 5mfg )

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