[pdbjlvh2]Protein Model on 5mfg_D_1_B

Protein Model on 5mfg_D_1_B_1 (TEMPLATE: 5mfg )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IMA1_HUMAN)	D 1 (D)	polymer(polypeptide(L)) [241 aa]	YIIIM5AII
2	b		B 1 (B)	polymer(polypeptide(L)) [269 aa]	YIIIM5AII	174P 175H(D) 176A(Q) 177H(Q) 180E(Q) 216P 217D(N) 218M(E) 219S(Q) 227R(Q) 263D(P) 264D(N) 265P(E) 266E(Q) 269A(Q) 305S(P) 306E(N) 307L(E) 308P(Q) 311T(Q) 347P 348K(N) 349T(E) 350N(Q) 353K(Q) 354E 390D(N) 392K(Q) 396E (identity: 17.2 %/39.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5mfg_D_1 identity=39.1%

queryA       164:IPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAV--EQILPTLVRLLH: 261
                : *     * **       *   *  **  *      **  **   *  **  *         *    * ***     *    * **     ** ** ** :
5mfg_D_1       6:LPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQ-----ILQEALWALSNIASGGNEQ--IQAVIDAGALPALVQLLS:  98
SecStr          :HHHHHHHTT S HHHHHHHHHHHHHHHTT HHHHHHHHHTT HHHHHHGGG S HH-----HHHHHHHHHHHHTTS HHH--HHHHHHHT HHHHHHGGG:    
ExpBur          :beebbeebebeeeeebbebbeebbeebeeeeeebeebbeeebbebbeebbebeeee-----bbebbbebbbbbbebeeeb--bbbbbeeebbebbbebbe:    
Contact         :          bbbb  b                                   bbbb       b                                    

queryA       262:HDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSN: 361
                :      *    ** *    * ** *  *   *  * ** **      *   ** *  **  *  ** * *******     **  *   *  ** *  **:
5mfg_D_1      99:SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSN: 198
SecStr          : S HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHHH:    
ExpBur          :beeeebbebbbebbbbbbebbeebbebbbeeebbeebeebbebeeeebbebbbebbbbbbebbeebbbbbbeeebbebbbebbebeeeebbebbbebbbe:    
Contact         : bbbb  b                                   bbbb  b                                   bbbb  bb       

queryA       362:ITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGG: 408
                :*  *   *** *   *  * **  **        ** **  *  ***:
5mfg_D_1     199:IASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGG: 245
SecStr          :HHTS HHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHHHHTT  :    
ExpBur          :bbebbeebbebbeeeebeebbeebeebeeeebeebbeebeeebeeee:    
Contact         :                            b b   b

Protein Model on 5mfg_D_1_B_1 (TEMPLATE: 5mfg )

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