[pdbjlvh2]Protein Model on 5mfg_C_1_A

Protein Model on 5mfg_C_1_A_1 (TEMPLATE: 5mfg )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IMA1_HUMAN)	C 1 (C)	polymer(polypeptide(L)) [270 aa]	YIIIM5AII
2	b		A 1 (A)	polymer(polypeptide(L)) [282 aa]	YIIIM5AII	175H(N) 176A(E) 177H(Q) 180E(Q) 181Q(E) 216P 217D(N) 218M(E) 219S(Q) 227R(Q) 228N(E) 263D(P) 264D(N) 265P(E) 266E(Q) 269A(Q) 270D(E) 305S(P) 306E(N) 307L(E) 308P(Q) 311T(Q) 312P(E) 347P 348K(N) 349T(E) 350N(Q) 353K(Q) 354E 390D(N) 392K (identity: 12.9 %/41.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5mfg_C_1 identity=41.4%

queryA       144:LTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCR--NKN: 241
                :*  ****  **  ** * ** **   ** **   *   * *** ***  *      **  **   *  **  *         *    * ***     *  :
5mfg_C_1      28:LSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQ-----ILQEALWALSNIASGGNEQ: 122
SecStr          :HHHHHHTTHHHHHHHHHTT HHHHHHHTT S HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHTT S HH-----HHHHHHHHHHHHHTS HHH:    
ExpBur          :eeeeeeeeeeeebeebeeeebeebeeebebeeeeebeebbeebbebbebbeebbbbbbeeebbebbeebbebeeee-----bbebbbebbbbbbebbeeb:    
Contact         :                               bbb  bb                                  bbbb       bb               

queryA       242:PAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFP: 341
                :    ***    ** ** **       *    ** *    * ** *  *   *  * ** **      *   ** *  **  *  ** * *******    :
5mfg_C_1     123:IQAVIDAG--ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALV: 220
SecStr          :HHHHHHTT--HHHHHHHHTT S HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHH:    
ExpBur          :bbbbbeee--bbebbeebbebeeeebbebbbebbbbbbebbeebbebbbeeebbebbbebbebeeeebbebbbebbbbbbebbeebbbbbbeeebbebbb:    
Contact         :                     bbbb  bb                                  bbbb  bb                             

queryA       342:SLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTS: 406
                : **  *   *  ** *  ***  *   * * *   *    *    *    * ****  *     *:
5mfg_C_1     221:QLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHENEKIQKEAQEALEKLQS: 285
SecStr          :HHTT S HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHTTT S HHHHHHHHHHHHHS  :    
ExpBur          :ebbebeeeebbebbbebbbbbbebbeebbebbbeebbeebbeebeebeeeebeebbeebeeebee:    
Contact         :     bbbb  bb                                   b b

Protein Model on 5mfg_C_1_A_1 (TEMPLATE: 5mfg )

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