Protein Model on 4u2x_E_1_B_1 (TEMPLATE: 4u2x )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(IMA1_HUMAN) E 1 (E) polymer(polypeptide(L)) [173 aa] Importin subunit alpha-6 :IMA6_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [215 aa] Membrane-associated protein VP24 :VP24_EBOZM 387S(Q) 391F 392K(R) 394Q(R) 427N(D) 430T 431A(V) 432K(M) 433D 465E 466E 468G(Y) 470L 471D 472K 474E 475A(F) 478N(S) (identity: 50.0 %/50.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4u2x_E_1 identity=50.3%
queryA       330:VVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLL: 429
                :*     **     **  **  * *** ** ******   *** *      * *   * ** * * *** ** ** ***** *** ***  * * **  **:
4u2x_E_1       3:VILNCSALPCLLHLLSSPKESIRKEACWTVSNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVALGCIKPLCDLL: 102
SecStr          :     SSSHHHHHHTT S HHHHHHHHHHHHHHHTS HHHHHHHHHTT HHHHHHHHHHS HHHHHHHHHHHHHHHHH  HHHHHHHHHHT HHHHHHGG:    
ExpBur          :eeeeeeeeeebeeebebeeeeeebebbeebbeebeeeeeebeebbebebbeebbebbeebeeebbeebbebbbbbbeebeeebbeebbeeebbebbbebb:    
Contact         :                                                         b   bb b                                b  

queryA       430:TAKDTKIILVILDAISNIFQAAEKLGETEKLSI-----MIEECGGLDKIEALQNHENESVYKASLSLIEKYF: 496
                :*  * **  * *    **    *         *      ***  ****** ** ***   *     *** **:
4u2x_E_1     103:TVMDSKIVQVALNGLENILRLGEQESKQNGIGINPYCALIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYF: 174
SecStr          :G S HHHHHHHHHHHHHHHHHHHHHHHHHSS   HHHHHHHHTTHHHHHHHHTT SSHHHHHHHHHHHHHHT:    
ExpBur          :ebeeeebbebbbebbbbbbebbeebbeeeeeeebebbeebeebebeebbeebeeeeeeebeeebeebbeebe:    
Contact         :bbbb                                    bb b bbb bb  b                                              


Input Residue Numbers for Focused Sites

ex) 2,15,123