[pdbjlvh2]Protein Model on 4d49_B_1_D

Protein Model on 4d49_B_1_D_1 (TEMPLATE: 4d49 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IMA1_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [239 aa]	ARMADILLO REPEAT PROTEIN ARM00027
2	b		D 1 (D)	polymer(polypeptide(L)) [9 aa]	POLY ARG DECAPEPTIDE	280D(S) 282P(G) 319N 321V(A) 322T(S) 323G 324T(N) 325D(N) 328T(I) 354E 357W 361N 363T(A) 364A(S) 365G 366R(N) 367Q(N) 370I 396E 399W 402T(A) 403N 405T(A) 406S 407G 408G(N) 409T(N) 413I 439V(E) 442D(W) 446N 449Q(S) 450A(G) (identity: 42.4 %/35.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4d49_B_1 identity=35.7%

queryA       253:LPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQ: 352
                :**  *  *   *   *       *    * ** *      *    *****          *  ** **  *  ** *  * ****     **        :
4d49_B_1       6:LPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQKLIEAGALSPLVKLLDDASEEVIKEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVI: 105
SecStr          :HHHHHHGGG SSHHHHHHHHHHHHHHHTS HHHHHHHHHTT HHHHHHGGG S HHHHHHHHHHHHHHTTS HHHHHHHHHTTTHHHHHHHHHHS HHHH:    
ExpBur          :beebbeebebeeeeebbebbebbbebbeeeeeebeebbeeebbebbbebbeeeeeebbeebbebbbebbebeeebbeebbebebbebbbebbeebeeebb:    
Contact         :                           b b                                    b bbbbb  b                        

queryA       353:KEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAE: 452
                :*** *   **  *   ***     *    **  *  *     ******  *  **   ***  *   *   **  **       *     ** **     :
4d49_B_1     106:KEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVIKEAVWAIANIASGNN-EQIQKLIEAGALSPLVKLLDDASEEVIKEAVWAIANIASGNN: 204
SecStr          :HHHHHHHHHHTTS HHHHHHHHHTT HHHHHHHHHHS HHHHHHHHHHHHHHTTS H-HHHHHHHHTTTHHHHHHHTTSS HHHHHHHHHHHHHHHTS H:    
ExpBur          :ebbbebbbbbbebeeebbeebbeeebbebbbebbeebeeebbebbbbbbbbbbebee-ebbeebbeeebbebbbebbeeeeeebbebbbebbbebbebee:    
Contact         : b  b   b bbbbb  b                         b  b  bb bbbbb   b                         b  b   b  bb  

queryA       453:KLGETEKLSIMIEECGGLDKIEALQNHENESVYKASLSLIEKYFS: 497
                :            ** * *   * ** * ** * *      *   *:
4d49_B_1     205:EMKQK------LEEAGALPALEKLQSHANEEVQKNAQAALEAFNS: 243
SecStr          :HHHHH------HHHTTHHHHHHHTTS SSHHHHHHHHHHHHHT -:    
ExpBur          :ebbee------beeeebeebbeebeeeeeeebeebbeebbeebe-:

Protein Model on 4d49_B_1_D_1 (TEMPLATE: 4d49 )

Input Residue Numbers for Focused Sites