Protein Model on 1un0_B_1_D_1
(TEMPLATE: 
1un0
)Protein Model on 1un0_B_1_D_1
(TEMPLATE: 1un0
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[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(IMA1_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [439 aa] | IMPORTIN ALPHA SUBUNIT :IMA1_YEAST | |
| 2 | b | D 1 (D) | polymer(polypeptide(L)) [16 aa] | NUCLEOPORIN NUP2 :NUP2_YEAST | 231W 234S 235N 238R 239N(G) 240K 270D 273W 277Y 280D 281G 311T 312P 315R 319N 321V 322T 323G 328T 353K 354E 357W 360S 361N 362I 364A 365G 369Q 396E 399W (identity: 96.7 %/49.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1un0_B_1 identity=49.1% |
queryA 81:IVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISE: 180
: ** ** ** * **** **** * ** * * * * * ************ *** *** * * ** ** *:
1un0_B_1 5:MTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKE: 104
SecStr :HHHHTT S HHHHHHHHHHHHHHHT SSS HHHHHHTT HHHHHHTTSTTS HHHHHHHHHHHHHHHTS HHHHHHHHHTT HHHHHHHHHHS HHHHH:
ExpBur :bbebbeeeeeeebeebbeebbeebeeeeeebbeebbeeebbebbbebbeeeeeeebbbbbbebbbebbeeeeebbeebbeeebbebbbebbeebeeebee:
queryA 181:QAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTD: 280
:** ***** *** ** * * * * * * * ********* * * * * * **** * * * * * ******* *:
1un0_B_1 105:QAIWALGNVAGDSTDYRDYVLQCNAMEPILGLF-----NSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSD: 199
SecStr :HHHHHHHHHHHS HHHHHHHHHTT HHHHHHGG-----GS HHHHHHHHHHHHHHH STT HHHHGGGHHHHHHHTT S HHHHHHHHHHHHHHTS:
ExpBur :bbbebbbbbbbeeeebbeebbeeebbebbbebb-----eeeeebbbebbbebbbbbbeeeeeebeeebbeebbebbbebbeeeeeebbbbbbebbbebbe:
Contact : b bb bbb b b b b
queryA 281:GPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVP: 380
:** * * * ** ** ****** ****** * ****** ** * ** ** ** *** ** ****** *** * * *:
1un0_B_1 200:GPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIP: 299
SecStr :S HHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHTT SSHHHHHHHHHHHHHHHTS HHHHHHHHHTT HH:
ExpBur :eeeebbeebbeeebbeebbebbebeeeebbebbbebbbbbbebeeebbeebbeeebbebbeebbebeebebeebbbebbbebbeeebebbeebbebebbe:
Contact :b bb b b bbb b bb b bbb bb b
queryA 381:FLVSVLSKADFKTQKEAVWAVTNYTSGGTV--EQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSI-----MIEECGGLDKI: 473
: ** * * ** *** ** * *** * *** * * ** ** * ** * *** ** * * * * ** ** **:
1un0_B_1 300:PLVKLLEVAEDKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKI: 399
SecStr :HHHHHHHHS HHHHHHHHHHHHHHTTTTTT HHHHHHHHHTT HHHHHHHTTSS HHHHHHHHHHHHHHHHHHHHHHHHTT S HHHHHHHHTTHHHHH:
ExpBur :bbbebbeebeeebeeebbebbbbbbebbeeeeebbeebbeeebbebbbebbebeeeebbbbbbebbbbbbebbeebbeeeeeeebebbeebeebbbbebb:
Contact : b b
queryA 474:EALQNHENESVYKASLSLIEKYFSVEEEE-DQNVVPE: 509
: * ** * ** ** ** * * :
1un0_B_1 400:FNCQQNENDKIYEKAYKIIETYFGEEEDAVDETMAPQ: 436
SecStr :HHGGGSS HHHHHHHHHHHHHSS SS :
ExpBur :bebbebeeeebbebbeebbeebbeeeeeeeeeeeeee:
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[assembly_id:2]
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