[pdbjlvh2]Protein Model on 8eqs_A_1_D

Protein Model on 8eqs_A_1_D_1 (TEMPLATE: 8eqs )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(AP3A_SARS2)	A 1 (A)	polymer(polypeptide(L)) [192 aa]	ORF3a protein :AP3A_SARS
2	b		D 1 (D)	polymer(polypeptide(L)) [27 aa]	Apolipoprotein A-I :APOA1_HUMAN	128W 206Y 207F 209S(E) (identity: 75.0 %/74.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8eqs_A_1 identity=74.2%

queryA        40:SLPFGWLIVGVALLAVFQSASKIITLKKRWQLALSKGVHFVCNLLLLFVTVYSHLLLVAAGLEAPFLYLYALVYFLQSINFVRIIMRLWLCWKCRSKNPL: 139
                :*******  *** ******* *** * ******* **  * ********* ********** ** ******* **** **  ***** ****** *****:
8eqs_A_1      40:SLPFGWLVIGVAFLAVFQSATKIIALNKRWQLALYKGFQFICNLLLLFVTIYSHLLLVAAGMEAQFLYLYALIYFLQCINACRIIMRCWLCWKCKSKNPL: 139
SecStr          :   SHHHHHHHHHHHHHHHHHTT    SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSHHH:    
ExpBur          :eeeeeeeeebeeebeebeebbeeeeeeeeebbeeebeeeeebeebeeebbebbeeeeeeeeeeeeeeeebeeeeeebeebeeeeeebeebbeebebebbe:    
Contact         :                                                                                        b           

queryA       140:LYDANYFLCWHTNCYDYCIPYNSVTSSIVITSGDGTTSPISEHDYQIGGYTEKWESGVKDCVVLHSYFTSDYYQLYSTQLSTDTGVEHVTFFIYNKIV: 237
                :******* ****  ***********  ** * ***        ******* *   ***** ** * ***  **** ***  **** *  **** ** *:
8eqs_A_1     140:LYDANYFVCWHTHNYDYCIPYNSVTDTIVVTEGDGXXXXXXKEDYQIGGYSEDRHSGVKDYVVVHGYFTEVYYQLESTQITTDTGIENATFFIFNKLV: 237
SecStr          :H   SEEEEEE SS EEEEEESS  SEEEEEEE  ------  EEEETTEEEE  S   SEEEEE SS EEEEEEEEEE HHHH  TT EEEEEEE  :    
ExpBur          :bbebeebbbbebeeeebbbbbeeeeeebebbbbee------eeebebeeeebeeebeeeeebbbbbeeeebebeeeeeeeeeeeeeeebeebebeeee:    
Contact         :                                                                  bb b

Protein Model on 8eqs_A_1_D_1 (TEMPLATE: 8eqs )

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