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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(SPIKE_SARS) | B 1 (B) | polymer(polypeptide(L)) [926 aa] | Spike glycoprotein,Fibritin :SPIKE_SARS:WAC_BPT4 | |
2 | b | G 1 (A) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 544R (identity: 100.0 %/90.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7zh5_B_1 identity=90.2% |
queryA 31:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 130 :**************************************** **************************** ***************: 7zh5_B_1 18:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHXXXXXXXNPVIPFKDGIYFAATEKSNVVRGWVFGSXXXXXXXXXXIINNSTNVVIRACNF: 117 SecStr : EEESB B S S EEEEEEEE TTEEE B ------- EE SS EEEEE SS TT EEEE ---------- B SSSS B S : ExpBur :eeeebbeebbeeeeeeebeeeeeebeeebbbbeeebebee-------eeebebeebbbebeeeeeeebbbeeeee----------eeeeeeeeeeeeeee: queryA 131:ELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVR-----------------------: 207 :*************** : 7zh5_B_1 118:ELCDNPFFAVSKPMG--------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXX: 155 SecStr : SS TTT -------------------------------------------------------------------------------------: ExpBur :eeeeeeeeeeeeeee-------------------------------------------------------------------------------------: queryA 208:---------------------------------------DLPSGFNTLKPIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDE: 268 : ***************************** *******************: 7zh5_B_1 156:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLPSGFNTLKPIFKLPLGINITNFRAILTXXXXXXXXXXXXXAAYFVGYLKPTTFMLKYDE: 255 SecStr :--------------------------------------- SB B EEEE ------------- EEEEE EEEEEEEEE T: ExpBur :---------------------------------------ebeeeeeeeeeeeeeeeeeeeeebebbee-------------ebbbbbebeebebbbebee: queryA 269:NGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYG: 368 :****************************************************************************************************: 7zh5_B_1 256:NGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYG: 355 SecStr :TS EEEEEETTS HHHHHHHHHT S SEEEEEEEEEB B S B THHHHT S BTTS EEEEE S B S HHHH SEEEESS: ExpBur :ebebeebbbbebebbbbbbbeeeeeebeebeeebeebebeeebebebbeeeeeebebeebbeeeebebbebbeeeebeebbbebeebeeeeeeeeeebee: queryA 369:VSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCT: 468 :*********************************************************** ************************ : 7zh5_B_1 356:VSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNXXXXXXXXXXXKYRYLRHGKLRPFERDISNVPFSPXXXXXX: 455 SecStr :S GGGGGG BSSEEEEEEEE SSGGGGSSSS HHHHHT SS EEEEEEE ----------- SS TT ------: ExpBur :bebeebeeebbbbbebbbbebeeeebeebbeeeeeebbbebbebeeebebbbbbbeeee-----------eebeebeeebeeeeeeeeeeeeee------: queryA 469:PPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTS: 568 : ****************************************************************************: 7zh5_B_1 456:XXXXXXXXXXXXXXXXXXXXXXXXPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTS: 555 SecStr :------------------------ EEEEEEE SSSS BB S SS EEEBSSS EEE B TT B TTS EEETTTE: ExpBur :------------------------eebbbbbbbeeeeeebbbbbeeeeeeeeeeebbebbbeebeeebbbeeeeeebeeeebeeeeeeeeebbbebeeee: Contact : b queryA 569:EILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRS: 668 :********************************************************************************************** : 7zh5_B_1 556:EILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXX: 655 SecStr :EE EEEEEEEES SSS S EEEEESS SSHHHHHHHTT BSS SS S EEEETTEEEES EE S B SEEETTTEEEE ------: ExpBur :ebebeeeebebbbbbbbbbbeeeeebbbbbeebebeebbebbeeeebebebeeeebeeeeeebeebbbbebbeeeeeeebebebeeebbbbebe------: queryA 669:TSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVK: 768 : ************************************************************************************************: 7zh5_B_1 656:XXXXSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVK: 755 SecStr :---- EEEEB SS EEEE EEEEEEEEEE EEEE HHHHH SS HHHHHHHHTT SSHHHHHHHHHHHHHHHHHHHHHHHTT S: ExpBur :----ebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbebebeebbbeeeeebbebbeeeeeeeeebeeebeebbebbeebbeebbeebe: queryA 769:QMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGW: 868 :******************************************* *************************************: 7zh5_B_1 756:QMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLAXXXXXXXXXXXXXXXXXXXXICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGW: 855 SecStr :S S EETTEE TTTS TTSSSSS HHHHHHHHHS -------------------- TT EEEE SS HHHHHHHHHHHHHHHHSS S: ExpBur :eeeeeeeebebebbebeebbeeeeeeeeebebbebbbeebeee--------------------eeeeeeebbeeeeeeeeeeebbeebbbbbbbbbebbe: queryA 869:TFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDK: 968 :****************************************************************************************************: 7zh5_B_1 856:TFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDK: 955 SecStr : SSS SHHHHHHHHTTTT THHHHHTHHHHHHHHHHHHHHHHHHHHT S S HHHHHHHHHHHHHHHHHHHGGG SSSS SSSSSSSSSSTT: ExpBur :ebeeeeeeeeebeebbbebbeebebeeebbeeeeeebbeebeebbeebeeebeeeeeebeebeebbeebeebeeebeeeeeeeeebeeeebeebeeebee: queryA 969:VEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGK:1068 :****************************************************************************************************: 7zh5_B_1 956:VEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGK:1055 SecStr :TSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS STTSSSSSS EEEEEEETTEEEEEEEEEE EEEE S EESSSE: ExpBur :eebeeebeebbebbbebbeebbeebeeebeebeeebeebbebbeebbbbbbeeeebbbeeebbbbbbbbbeebbbbbbbbbeeeeeeebebbebbbeeee: queryA 1069:AYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTV:1119 :***************************************************: 7zh5_B_1 1056:AYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTV:1106 SecStr :EEEESS EEE TTTS EEE SSS STTEEEEEETTTSSS EE : ExpBur :bbeeeebbbbeeeeebebbbeebeeeeebeeeebeeeeeeeeeeeeeeeee: |